Solea solea (common sole): 131455288
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Entry
131455288 CDS
T10853
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssoe04040
]
131455288 (scn1laa)
Ion channels [BR:
ssoe04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
131455288 (scn1laa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
PFF1_TM
Zip
New_glue
FUT8_N_cat
ATP-synt_B
Spem1
RskA_C
Motif
Other DBs
NCBI-GeneID:
131455288
NCBI-ProteinID:
XP_058478814
LinkDB
All DBs
Position
2:26922849..26946755
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AA seq
1986 aa
AA seq
DB search
MAQLVPPGPDSFRPFTRESLNAIERRIAQENAKKPKGEKKKRNDENVPKASRDLGTGKSL
PLLYRDIPKGMVSTPLEDLDPFYSNQKTFIVLNKGKTIYRFNAAPALYLLSPFNPLRKIS
IKILVHSLFNVVIMCTILANCAFMTLSRQPDWAKNVEYTFTAIYTSEFLIKVLAQGFCIG
KFTFLRDPWNWLDFSVIILAYVTEFVNLGNFSAIRIFRVLRAFKAISVIPGLKTIVGALF
QSVKKLSNVMILTVFCLSVFALIGLQLFMGHLKQKCVKNPRNISSYIGTDAFNLTEFILN
SENHYKLPGKRDPLLCGNGSEAGQCPEGYVCLRVGKNPDYGYTSFDSFGWAFLSLFRLMT
QDYWEFLYQQTLRAAGKPYMLFFVLVIFLGSFYLINLILAVVAMAYEEQSQATIKEAKEK
EEEYQAMLEQLKQQQEDNQAAATVAATDTGQASDKAGGTESSSETSKLSSKSAKERRNRR
KKRKEEEGKGADEKFPKSESQDSIKKARCRFSVDANLLNYNMKSSPAHQSFLSFRGPPFS
PRRNSRTSLFSFRSQTQDVGSENEFADDENSIFEDNLNQRGSVFLPRAFERRSSSMSQCS
FLSHLLFPASGIKHSSVDCNGVVSLVGGNSLPSSPVRRHLPKVTVDMASITDNADTTDAE
YRQASGGANQEYMDFLDGPEARQRALSTASVITSTMEELEESRQKCPACWNKFAHTFLIW
ECCPAWLKIKKLVKLIVMDPFADLTITICIVLNTLFMAMEHYPMTGRFSSMLKVGNQVFT
GIFTAEMVLKIIALDPYHYFQERWNIFDGIIVCLSMMELCLEKVGGMSVLRSFRLLRVFK
LAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKKYNDCVCKISPSCT
LPRWHMSDFFHSFLIVFRVLCGEWIETMWDCMEVAGTPMCIIVYMMVMVIGNLVVLNLFL
ALLLSSFSADNLAATEDDRDTNNLKIAIARIHRGIAFAKSILRSSCNSVCLRNKKKRKAE
DKSLDELQKPFGPNGVPDHTIKDFPKNGNGDVTGVDKTGDKYIVSSKSDDSIMSFINNPS
LTITVPIAVGESDFENLNTEDFSSASSEPAGFHMTADDDGQLSSSEGSTVDGLPPGEGRE
SIDFELEESMDPDGCFPEDCVQKFQCCQVNVEVGWWKVWWTLRKTCFRIVEHNWFESFII
FMILLSSGALAFEDVYIEKRKTIKTVLEFADKIFTYIFILEMLLKWVAYGFAKYFTNAWC
WLDFLIVDVSLVSLVATAMGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIP
SIFNVLLVCLIFWLIFSIMGVNLFAGKYYYCTNKTSDEPLPTSLVKNVTDCKAQPGTRWR
LHKINFDNVGAGYLALLQVATFKGWMEIMFAAVDSQANQEEQPEYEINLIMYLYFVVFII
FGAFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSN
KIQAYIFDFTTKQAFDIVIMVLIWLNMVAMMVETDDQSDEMEDILYYINIVFISIFTGEC
LLKMISLRHYFFTNGWNIFDFIVVILSIIGMFLADLIEKYFVSPTLFRVIRLARIGRVLR
LIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFAMSNFAYVKREAGIDDLFNFE
TFGNSMICLFQITTSAGWDGLLSPLLNKNKDDCDPTKEHPGSSVVGDCGNPPVAIAFFVS
YIIICFLIVVNMYIAVILENFSVATEESADPLSEDDFEMFYEVWERFDPHATQFMEYNKL
AEFADALEPPLRIAMPNRLELIAMDLPMVSGERIHCLDILFAFTKRVLGEGGEMDVLRGQ
MEERFMASNPSKVSYEPITTTLRRKQEDMSAVVIQRAFRHYIKAIAAGKRSDTSYDVVQK
DKALIDNEIVVKDDLKKNQDTHQSELAPSTASQSSCNSVTTNGKNKYEKDKSEKEVVGKD
VRDQDE
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacttgtaccgccaggtccagacagcttccgtccttttactcgtgagtccctc
aatgccattgagagacggatcgctcaggagaacgccaagaaaccaaaaggcgagaagaaa
aaacgcaatgatgagaatgtgcccaaggccagccgtgacctgggaacaggcaaatcgctc
cctctcctgtacagggacatccctaaaggcatggtgtcgacaccgctggaggacctggac
cccttctacagtaatcagaaaacttttatagtattaaacaaaggaaagaccatctaccgc
ttcaacgccgctcctgccttgtacctcctgagtcctttcaaccctctcagaaaaatatca
atcaagattttggtgcactcattgttcaacgtggtgatcatgtgcaccatccttgccaac
tgtgcgttcatgacactgagtaggcagcctgactgggcaaagaatgtggagtacacattc
actgcaatctatacctctgaattcctcattaaagttttagctcaagggttctgtatcgga
aagttcacgtttctgagagatccctggaactggctggatttctctgtcattattttggcg
tatgtaacagagtttgtaaacctaggcaatttttcagctattcgcattttcagagtgctg
agagctttcaaagctatttcagttataccaggcctgaagaccatcgttggcgcgttgttc
cagtcagtaaagaagctttccaatgtgatgatccttacagtcttctgcttaagcgtcttt
gcccttatagggttgcaactatttatgggtcatttaaagcaaaagtgtgtaaagaatcca
agaaacatttcatcatatattgggacagacgccttcaacttgactgaattcatactcaat
agcgaaaatcactataaacttccaggaaagcgagatccactgctctgtggaaatggcagt
gaagctgggcagtgtccagagggttacgtttgccttcgggtgggaaagaaccccgactat
ggctacacaagcttcgactcattcggttgggccttcctttctttgtttagactgatgaca
caggattactgggaattcctttatcaacagacgttgcgagcagcagggaagccgtacatg
ttgttctttgtgctggtgatattccttggttccttctacctgatcaaccttatcttggct
gtagtagccatggcctacgaggagcagagccaagccaccattaaagaggctaaggagaag
gaggaggagtatcaggccatgctggagcagctgaaacaacagcaagaggataatcaggca
gcagcaactgtagctgcgactgacactgggcaggccagtgacaaagctggcggcactgag
agctcctctgaaacctccaagctcagttctaaaagtgccaaggagagacgcaacaggcgg
aaaaaaagaaaggaggaggagggcaaaggggctgatgagaaattccccaaatcggagtcg
caggacagtataaagaaggctcgctgccgcttctctgtggatgcaaacctgctcaactac
aacatgaaaagctcccctgcacatcagtcctttctgagttttcgtggaccgccgttctca
ccgagacggaacagcaggaccagccttttcagttttcgaagccaaacacaggacgtagga
tcggagaatgagtttgccgacgatgagaacagtatttttgaggacaacctgaatcagcga
ggctctgtttttcttccccgagcgtttgagcgacgaagcagcagcatgagccagtgcagc
ttcttgtcacatctcctttttccagccagcgggatcaagcacagctcagtagactgtaat
ggggtagtgtccctggtgggtgggaattctctgccatcatcacctgtgaggcgccacctg
cctaaagtgacagtggatatggcttccatcacagacaatgctgataccactgatgcagag
tacagacaggccagtggaggagcaaaccaggagtatatggacttccttgatggcccagag
gccagacagagagctcttagcacagctagtgtcattaccagcacaatggaggagcttgaa
gagtcgaggcagaagtgtcctgcttgctggaacaagtttgcccacactttcctcatctgg
gaatgctgtccagcatggctgaagatcaagaagctggttaaactaattgtgatggacccg
tttgcagacctcaccatcaccatatgcatcgtacttaacacgttgtttatggcaatggag
cattatccaatgactgggcgtttctcctctatgctgaaagtgggaaatcaggttttcact
ggtatattcactgcggaaatggtcctcaagatcattgcgctggatccataccattacttc
caggagaggtggaatatttttgacggaatcattgtctgtttaagcatgatggagctttgt
ttggaaaaagtgggtggcatgtctgttctgagatcgttccgactgctgagagtattcaag
ttggccaaatcatggcccactctaaacacactaatcaaaataattggcaattcagtgggg
gctttgggcaacctgaccctggttctggctatcatcgtctttatctttgccgtggtgggc
atgcagctgtttggaaaaaaatacaatgactgtgtgtgtaaaatctcacccagctgcact
ctgccccgatggcacatgagtgacttcttccattcattcctcattgtgttccgagtgctt
tgtggagagtggatagagaccatgtgggactgtatggaggtggctgggacgcccatgtgc
atcattgtctacatgatggtcatggttattggaaaccttgtggtgctgaacctgttcctg
gccttgctgctgagttcctttagtgccgacaacctggcagcgacagaggatgacagggat
acgaacaatctgaagattgccattgcccggattcacagaggaatcgcttttgccaagtcc
atactccgcagcagctgcaacagtgtctgtctccggaacaagaagaaaaggaaggctgag
gacaaatcgcttgatgagcttcagaaaccttttggaccaaacggtgtccccgaccacacc
atcaaagactttccaaagaatggcaatggggatgtgactggagtggacaagactggagac
aagtatatagtcagcagcaagagtgatgattctataatgtctttcatcaacaatccgagt
ctgactatcacggttcctattgctgtgggggagtctgactttgaaaacctcaacacggag
gacttcagcagtgcctcttctgaaccagcaggattccatatgactgcagatgacgacggg
cagctcagctcctcagagggcagcacagtggatggtttgccacccggggaaggcagagag
tccattgactttgaacttgaagaatctatggatcctgacggctgctttcctgaagactgc
gtgcagaagttccagtgctgtcaggtgaatgtggaggtgggatggtggaaggtgtggtgg
acgctaagaaagacctgtttccggatagtggagcacaactggtttgagagcttcatcatc
ttcatgatcctgctcagcagtggagcactggcatttgaagatgtctacattgagaagagg
aagaccataaaaactgtgttggagtttgcagacaaaatcttcacctacatcttcattctc
gagatgttattgaagtgggtggcgtatggatttgccaaatacttcactaatgcctggtgc
tggttggacttcctcattgttgatgtgtcattggtcagcctggtggccactgctatggga
tattctgatctcggtcccatcaagtctttgagaaccctgcgagctttgaggcctctgaga
gcgttgtcgcggtttgagggcatgagggtggttgttaacgccctgctcggcgccattcct
tccatcttcaatgtgctgctggtatgtctcatattctggctcatcttcagcatcatgggc
gtcaacttatttgcggggaagtactactactgtactaacaaaacctcagatgagcctctc
cctacgtcactggtcaaaaacgtgacggattgcaaagcacagccggggactcgctggaga
cttcacaaaatcaactttgacaatgttggagccggttatctcgcactgctgcaagtggct
acattcaagggctggatggaaatcatgtttgctgccgtggactcgcaagcaaatcaagaa
gagcaacctgagtatgagatcaacctgattatgtacctgtattttgttgtgttcatcata
tttggggccttcttcacactgaatctctttattggtgtcatcatagacaatttcaatcag
cagaagaaaaagtttggaggtcaggacatcttcatgactgaggaacagaagaaatactat
aatgccatgaaaaagctgggctcaaagaaaccacaaaaacctattccgagaccatcaaac
aagattcaagcgtacatctttgacttcacaacaaaacaggcgtttgatattgtaataatg
gttctgatatggctcaacatggtcgcaatgatggtggaaaccgacgatcagtcagacgaa
atggaagacattctctactacataaacatcgtattcatttccatcttcactggagagtgt
ttgttgaagatgatctctctccgccattactttttcaccaacggctggaatatcttcgat
ttcatcgtcgtcattctctccatcattggtatgtttcttgctgacctgatagaaaagtat
ttcgtttcgccgacactgttccgagtcatccgactggctcggatcggccgagtcctccgc
ctgattaaaagcgccaaaggaatccgcacacttttgtttgctttgatgatgtcacttcct
gccctgtttaacattggtctcctgctcttcttggtgatgtttatctacgctatctttgcc
atgtcaaactttgcttacgtcaaaagggaggcgggcattgatgacctcttcaattttgag
acgtttggcaacagcatgatctgcttgttccagatcaccacctcggcagggtgggatggc
ctcctttctccccttctcaacaaaaacaaagatgattgtgaccctactaaggagcatcct
ggcagttctgttgtaggagactgtggaaaccctcctgtggcgattgctttctttgttagc
tacatcatcatctgtttcctgattgtggtgaatatgtacattgcagtcatcctggaaaac
ttcagcgtggccaccgaggagagcgcggacccactaagcgaggatgatttcgaaatgttt
tatgaggtatgggaaaggtttgatcctcatgcgacacagttcatggagtacaacaagctg
gcagaatttgcagatgctttggagccgccgttacgcatagccatgcctaaccggcttgaa
ctgatcgccatggatctacccatggtgagtggcgaacgcattcactgcttggatatcctg
ttcgcattcactaaacgtgttttaggggagggtggcgagatggatgtcctcagggggcag
atggaggagcgcttcatggcctccaacccttccaaggtgtcctacgagcccatcactacc
accttacgtcgcaaacaggaggacatgtcagccgtcgtcatccagcgagctttcaggcac
tatattaaggcaattgcggccggcaagcgttcagacacatcctatgatgtcgtccaaaag
gataaagcactcattgacaacgagattgtcgtcaaggacgatctaaaaaaaaatcaagac
actcatcagagtgaactagcaccttcaactgcctctcagtcgtcatgtaacagtgtgaca
acaaatggaaaaaacaaatatgaaaaggacaaaagtgaaaaggaggttgtgggcaaagat
gtccgagaccaagatgaataa
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