Solea solea (common sole): 131455636
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Entry
131455636 CDS
T10853
Symbol
scn1lab
Name
(RefSeq) sodium channel, voltage-gated, type I like, alpha b isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssoe04040
]
131455636 (scn1lab)
Ion channels [BR:
ssoe04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
131455636 (scn1lab)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
Spem1
ATP-synt_B
IQ
New_glue
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
131455636
NCBI-ProteinID:
XP_058479404
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Position
2:complement(5271264..5308543)
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AA seq
2026 aa
AA seq
DB search
MAQLLVPPGPDSFHPFVPESLAAIERCIAEEEARRPRSERRSDSDDENGPKPNSDLEAGK
SLPFIYGDIPPKLVSTPLEDLDTFYSSQKTFIVLNRGKTIFRFNATPALYILNPFNPLRR
IAIRVLVHSMFSMLIMFTILTNCAFMTLSNPPEWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRMPIASANATNGSNITGDDAM
FFSNTSIDINTTFVQNRAENPFNWTEYYSDENNYYYLPGRRDALICGNGSGAGFCPEGFI
CLKAGRNPDYGYTSFDTFSWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMIFFVLVIFLG
SFYLVNLILAVVAMAYDEQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQVAAAAATESGE
YSGRGGPTAESSSGTSKLSSKSAKERRNRRKKRKQREEEEEREGRKFHKSESEDSIKRSS
FRFSIDANRLSYEKRCSSPNQSLLSIRGSLLSPRRNSRASLFSFRGRARDMGSENDFADD
EHSTFEENDSRRGSLFLPRRLERRCSAVSQTSLGAPRVMLPANGKMHCAVDCNGVVSLVG
GTSVTTSPVGLLLPEGTTTDTELKKRRKGFRKPSMDYLEEPGPRQRAMSVASILTNTMEE
LEESRQKCPPCWYRFANTCLIWDCCPAWLKIKDVVNMVVMDPFVDLAITICIVLNTLFMA
LEHYPMTDEFDTVLSVGNLVFTGIFTAEMCFKIIALDPYYYFQEGWNIFDGIIVSLSLME
LGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAV
VGMQLFGKSYKECVCKISEDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQS
MCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRGIAFI
KSTVRQFLRSHCFGGASKATGLAEESKPLDELHSNGKGNCISNHTTVEITKEPSRVYITE
GNGRPGGGLVVGVRAGGDTTVKYPIEECDYMSFIHNPSLTVTVPIAVGESDFENLNTEDF
SSDSSDVEGSKEKLHVEPKHLSSSEGSTVDIRPPGDGVDSVELEPEESLDPEACFTEGCV
RRFQCCQINEEASHYKRWWTLRKTCFIIVEHNWFESFIIFMILLSSGALAFEDIYIEQRR
TIKTMLEYADKVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFLIVDVSLVSLVANALGY
SELSAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGV
NLFAGKYYYCVNTTNDEVFPISIVNNKTDCLNLVNDSARWKNVKINFDNVGAGYLALLQV
ATFKGWMDIMYAAVDSRQLESQPKYEENLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQ
QKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPTNAFQGCVFDCITKQAFDIVIM
ILICLNMVTMMVETDDQTNEMDDILFWINLVFIVLFTGECMLKMISLRHYYFTIGWNIFD
FVVVILSIVGMFLSDVIERYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLP
ALFNIGLLLFLVMFIYAIFGMSNFAYIKREAGIDDMFNFETFGNSMLCLFQITTSGGWDG
LLAPILNKWEPDCDSQMEHPGNSYKGNCGNPSVGIFFFVSYIIICFLIVVNMYIAVILEN
FSVATEESAEPLSEDDFEMFYEVWERFDPDATQFMEYSKLSDFADALDPPLRMPKPNMIH
LISMDLPMVSGERIHCLDILFAFTKRVLGEGGEMDMLRGQMEERFMASNPSKVSYEPITT
TLRRKQEDMSAVIIQRAYRRYMIRQAMKKSSTLYKEKMKEGIRDPDKDVMVISKFHENST
SEKTDMTPSTASPPSYNSVTKSDKDKYEKENRDKENKGKDLKDRKK
NT seq
6081 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgcccggacctgacagcttccaccccttcgtccccgagtct
ctggccgccatcgaaaggtgcatcgccgaggaggaggcccggagaccacggtcggagcgt
cgcagcgacagcgatgatgaaaatgggccgaagcccaacagtgaccttgaggcggggaaa
tctctgcccttcatttatggggacatccctcccaaactggtgtccacccctctggaggac
ttggacaccttctacagcagtcagaagaccttcatagtattgaatcgcgggaagacaatc
ttccgtttcaatgccacccctgccttgtacatcttaaaccccttcaaccccctaagaaga
atagctatcagagttttagtacactcgatgttcagcatgttgatcatgttcaccatcctg
accaactgtgctttcatgaccctaagtaatcccccagaatgggccaagaatgtagaatac
acattcacagggatctataccttcgagtcccttataaaaatcctggcaaggggcttctgt
gtggggaagttcactttcctccgggacccatggaactggctggatttcagtgttatcctc
atggcatatgtcacagagtttgtggacctgggcaatgtctcagcactacgaaccttcagg
gttctacgagccctgaaaactatttcagtcatcccaggcttgaagactattgtcggtgcc
ctgatccagtcggtaaagaagctgtcggacgtgatgatcctcactgtgttctgcctcagc
gtctttgccctcattggcctgcagctcttcatgggcaacctgaggcagaagtgcgtgcgc
atgcccattgccagtgccaatgccaccaacggcagcaacatcaccggcgatgacgccatg
tttttcagcaacacctcgatcgatatcaacaccacgtttgtgcagaaccgcgcggagaac
cccttcaactggacagagtactacagcgatgagaataattactattacctccctggccgt
agagatgctctgatctgtgggaatggcagtggcgctgggttctgtccagaaggctttata
tgtttgaaagctggtcgcaatccagattatggctacacaagctttgacaccttcagctgg
gccttcctctctctgttccgactcatgacccaggactactgggaaaatctctaccagcag
actttgcgtgctgctgggaaaccttacatgatcttcttcgtgctggtgatcttcctgggc
tccttttacttggtcaacctgatcttggctgtggtggccatggcttatgacgagcagaac
caggcgaccatcgaggaggctcagcagaaggaggaggagtttcaggccatgctggagcag
ctgaagaggcagcaggaggaggcacaggttgccgcagcagcagccacggagagcggagag
tacagcgggagagggggccccaccgccgagtcctcctcagggacttctaagctgagctca
aaaagtgccaaggagcgacgcaacaggcggaagaagaggaagcagcgggaggaggaagaa
gagagggaagggcggaagttccacaagtctgagtctgaggacagcatcaaaagatccagc
ttccgcttctctattgatgccaatcggctctcttatgagaagagatgttcctcccccaac
cagtctctcctcagtattcgtggatccctgctttcacctcggaggaacagccgagcgagc
ctgttcagcttccgcggccgggcacgcgacatgggctccgagaacgacttcgccgacgat
gagcacagcaccttcgaggagaatgacagtcgcagaggctctctgttcctgccacggcgc
ctggagcgccgctgcagcgccgtcagtcagacgagccttggggcgccgcgggttatgttg
cctgccaatggcaaaatgcactgcgctgtagactgcaacggtgttgtgtcactggtcggt
ggaacgtctgtaacaacctcccctgtaggtctcctgctgcctgagggtacaactacagat
acagagctgaaaaaacgtcggaaaggctttcgcaagccgtccatggactatcttgaagag
cccggaccccgacagagagccatgagtgtggccagtatcctcaccaacacgatggaagag
ctggaagagtcaagacagaagtgccccccctgctggtatagatttgccaacacctgtctg
atctgggattgttgtccagcgtggctgaaaatcaaggatgtcgttaacatggtggtgatg
gacccgtttgtggatctggcgatcacaatttgcatcgtccttaacaccctcttcatggcc
ttggagcattaccccatgaccgatgagtttgacactgtcctctcagttggaaacctggtg
tttacaggcatcttcacagcagagatgtgtttcaagatcatcgccttggatccctactac
tacttccaggagggctggaacatctttgacggcatcatagttagtctcagtctaatggaa
cttggcttggccaacgtcgagggcctgtctgtgcttaggtcctttagattgcttcgagtg
ttcaaactggccaagtcatggcctactttaaacatgctgatcaagatcattggtaactct
gtgggtgctctggggaacctcactctggtgctggccatcattgtcttcatctttgctgtg
gtgggcatgcagctgtttggcaagagctacaaggagtgtgtgtgtaagatctctgaggac
tgcgagctgccacgctggcacatgcacgatttcttccactccttcctcatcgtgttccgg
gtgctgtgtggggagtggatcgagaccatgtgggactgcatggaggtggcgggacagagc
atgtgcctaatagtcttcatgatggtcatggtcatcggaaaccttgtggtacttaacctc
ttcctggctctcctcctgagctcgttcagtgctgacaacctggcagcaactgacgacgac
agcgagatgaacaacctgcagattgcagtgggacgcatccagcggggtatcgccttcatc
aagtccacagtgcgccagttcctgcgcagccactgctttggcggggcaagtaaggcaacc
ggcctggcagaggagagcaaacccttggatgagttacacagcaacggcaagggcaactgc
atctccaatcacactacagtggagatcaccaaagaaccaagtcgggtgtacataacagag
ggcaatggtcggccaggaggggggctggtggtaggagtcagagctggtggggacactacg
gtgaaatatcccatagaggaatgtgactacatgtcattcattcataaccccagcctgaca
gtcacagtgcctattgctgtgggcgagtccgactttgagaacctcaacacggaggacttc
agcagcgattcgtcagacgtggagggcagcaaagagaagctccacgtagagcccaagcat
ctgagctcgtcggagggcagcacagtcgacattcgccccccaggagacggggtcgactcg
gtggagctggagccagaagagtctctggacccggaggcctgcttcacagagggctgtgtg
cgcaggttccagtgttgccagatcaacgaggaggccagccattataaacgctggtggaca
ctcaggaagacctgctttatcatagtggagcacaactggtttgagtccttcatcatattc
atgatcctgctcagcagtggagcgctggcgtttgaggacatttacattgagcagcggaga
accatcaaaaccatgctggagtatgcagataaggtctttacctacatcttcattctggag
atgctgctcaagtgggtggcgtacggctttgtcaagtactttaccaacgcctggtgctgg
ctcgacttcctcatcgtggacgtttccctggtcagcctggtagccaatgctctgggctac
tctgagcttagcgctatcaaatctctgaggacactccgagccctccggcccctgagggcc
ctgtctcggtttgagggcatgagggttgtagtgaacgcgctgctgggggccattccctcc
atcatgaacgtgctgctggtctgcctcatcttctggctcatcttcagcatcatgggcgtc
aacttgtttgcggggaagtactactactgcgtcaacaccaccaacgacgaggtcttcccc
atcagcatcgtcaacaacaagaccgactgcctgaacttggtgaacgacagcgcccgctgg
aagaatgtcaaaatcaactttgacaacgtcggggccggctatctggctctgttacaagtg
gcaacatttaaaggttggatggacataatgtacgcggctgtggactctcgacaattggaa
tcgcagcccaaatatgaagagaacttgtacatgtacctctactttgtcatcttcatcatc
tttggctccttcttcaccctcaacctgttcattggtgtcatcatcgacaacttcaaccag
cagaagaaaaagtttggaggtcaggacatcttcatgacagaagagcagaagaaatactac
aatgccatgaagaagttgggttccaagaaaccacagaagcccattcctcggcccacaaat
gcgtttcaaggctgcgtgtttgactgcatcacaaagcaggcctttgacattgtgatcatg
atcctcatctgccttaacatggtgaccatgatggtggagacggacgatcagaccaacgag
atggacgatatcctcttctggattaacctggtcttcatcgtgcttttcactggagagtgt
atgctgaagatgatctccctgcgtcattattacttcaccattggctggaatatatttgac
tttgtggtggtgattctgtccattgtaggtatgtttttatctgatgttattgagagatac
tttgtgtccccaacactgttccgagtgatccgtctggccagaattggccgaatcctccgt
ctcatcaaaggtgccaaaggaatccggacacttctctttgccttgatgatgtcactcccc
gccctcttcaacattggcctcctcctcttcctggtcatgttcatctatgccatcttcggc
atgtccaactttgcctacatcaagcgcgaggcgggaatcgacgacatgttcaattttgag
acctttgggaacagtatgctctgtttgtttcagattaccacctcaggtgggtgggacggt
ctgttggcgcccattctgaacaagtgggagcctgactgtgacagccagatggagcatccg
ggcaactcctacaaaggcaactgtggcaacccctcagtgggcattttcttctttgtcagc
tatatcatcatctgcttcctcatcgtggtcaacatgtacatcgccgtcatcctggagaac
ttcagtgtggcgacagaggagagcgccgagcccctgagtgaggacgactttgagatgttc
tatgaagtgtgggaacgattcgatccagacgcaacgcagttcatggagtacagtaagctc
tccgactttgcagatgccctcgatccgccattgcgcatgcccaagcctaatatgatccac
ctcatctccatggacttgccgatggtgagtggcgagcgcatccactgcctcgacatcctg
tttgccttcaccaagcgagtgttgggcgaaggcggcgagatggacatgttgcgcggacag
atggaggagcgcttcatggcctccaacccctcgaaggtgtcttacgagcccatcaccacc
accctccgccgcaaacaagaggacatgtcggccgtaatcattcagagagcctaccgacgc
tacatgatccgtcaggccatgaagaagtcctccacgctctacaaggagaagatgaaggag
ggcatccgtgacccggacaaggacgtgatggtcatcagcaagttccacgagaactccacc
tcggaaaaaacggacatgacgccgtccaccgcctccccaccctcctacaacagtgtgacg
aaatcagacaaggacaaatatgagaaagagaacagggacaaggaaaacaaagggaaagac
ttgaaagacagaaagaaatag
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