Solea solea (common sole): 131456495
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Entry
131456495 CDS
T10853
Symbol
cacna1c
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1C isoform X1
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04010
MAPK signaling pathway
ssoe04020
Calcium signaling pathway
ssoe04260
Cardiac muscle contraction
ssoe04261
Adrenergic signaling in cardiomyocytes
ssoe04270
Vascular smooth muscle contraction
ssoe04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
131456495 (cacna1c)
04020 Calcium signaling pathway
131456495 (cacna1c)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
131456495 (cacna1c)
09153 Circulatory system
04260 Cardiac muscle contraction
131456495 (cacna1c)
04261 Adrenergic signaling in cardiomyocytes
131456495 (cacna1c)
04270 Vascular smooth muscle contraction
131456495 (cacna1c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssoe04040
]
131456495 (cacna1c)
Ion channels [BR:
ssoe04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
131456495 (cacna1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
131456495
NCBI-ProteinID:
XP_058480855
LinkDB
All DBs
Position
3:32093728..32260511
Genome browser
AA seq
2374 aa
AA seq
DB search
MLRGLFRRKPKHERLQEEPEVRYKGLQVSERDLEYTYVRPGGSDYSPPPPLPRPPPPGLT
NEHSDGGSHGDHGGRGGGVNHGVGVVGLAPEHIATPGAALSWQAAIDAARQAKMMGNAAS
GGGAGLGSGGGGPISTASSTQRKRQHYSSKPKKQTTTTATRPPRALLCLTLKNPIRRACI
SIVEWKPFEIIILMTIFANCVALAVYIPFPEDDSNATNSNLERVEYLFLIIFTVEAFLKV
IAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKGDGATPIGGKAAGFDVKALRA
FRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFMGKMHKTC
VHEQTGTFAEEKPAPCAPDGAYGRHCAHNGTECKMGWEGPNDGITNFDNFAFAMLTVFQC
ITMEGWTDVLYWMQDAMGYELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARG
DFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGLDDDKPRNLSMPASENESVNTDNA
PGGDVEGETCCTRLANRISKSKFSRYSRRWNRLCRRKCRAGVKSQVFYWLVIFLVFLNTL
TIASEYHQQPQWLTDIQDIANKVLLALFTGEMLLKMYSLGLQAYFVSLFNRFDSFVVCGG
ILETILVETKIMSPLGISVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIASLLLLLF
LFIIIFSLLGMQLFGGKFNFDETRRSTFDNFPQSLLTVFQILTGEDWNSVMYDGIMAYGG
PSFPGMLVCIYFIILFICGNYILLNVFLAIAVDNLADAESLTSAQKEEEEEKERKKLARL
ASPEKRQNNEKPPLEVEKKEKKKEKIELKSITSDGETNTATKINMDDYCGDESEEKNPYP
ANDYIGDEDEEEPEMPVGPRPRPLSDIQLKEKAVPMPEARAFFIFSHTNQFRVLCHKIVN
HNIFTNLILFFILLSSISLAAEDPVKNDSFRNRILGYADHVFTGLFTIEIILKMTAYGAF
LHKGSFCRNYFNILDLVVVSVSLISSGIQSSAINVVKILRVLRVLRPLRAINRAKGLKHV
VQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKFFTCTDSSKHTEAECRGSYIMYKD
GDVGKPERASRIWENSDFNFDDVLQGMMALFAVSTFEGWPGLLYRAIDSHAEDVGPIYNY
RVVISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVEYALKARP
LRRYIPKNPYQYKVWYVVNSTYFEYLMFTLILLNTICLAMQHHGQTKNFNDAMNILNMLF
TGLFTVEMILKLIAFKPRGYFSDPWNVFDFLIVIGSIIDVILSEINPADSSSSSSSSSSS
SSSSSSSHPPVVRPMVRSDGNLVRLPTSSTIPPSLHPSIPPPATPSMGLQNSEENARISI
TFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQMFGKI
ALRDHTQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACSTYRPCEKGSTNENSTTNED
CGSQFAIIYFVSFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDP
EAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALV
RTALRIKTDGNLEQANEELRAIVKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQE
YFRKFKKRKEQGLVAKVPPKTALSLQAGLRTLHDIGPEIRRAISGDLTVEEEMDKGLKEP
VSAVSEDDIFRVKRTGGLFGNHVNYYNQSDGHGSFPQSFTTQRPLHISQKGSPCEGESPS
HEKLMDSTTFTPSSYSSSGSNANINNANNTGMVGVTTQGISRFPSPSISTVDGHTGQPLT
PILLPRSAWCFPPKRTCFYDNLMRSDSSDSHLPIIRRGEESMEETYDESYVDDREYHEDD
HSLSSDMLVYQDETCKQLTPMEEGEEVEDRRGGGGGGWQSPSVFLCPTSLVRRSSFNLEC
LRRQSRPDVSQKTAVPLHLVHHQALAVAGLSPLLRRSHSPTLFSRLCSTPPASPTALSSD
ASYQRVPFLRLEGSNSLEKLNTSLPSVNCGPWYSDSNGNSRGPSPSPSPTPGGSVSNQRP
PRPVSLTVPSLLRKDSSSLSHGSAGSLVEAVLISEGLGHFAQDPSFIEATKAELADACDM
TIEEMEQAANNLLNGSTPTNTTSSASSHSQNSPNGSVLLHTAATATATATVHRDRAVSLS
PSEGVGEAGGSRSSVHGPSSMEERQELLAEERGQEEEEEEEEEEEEEEEEEEEEVVVERE
EEEEQHRSSVVIGGTRQRNSGLLEDEDMECVTSL
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgaggactgtttcggaggaaacctaaacatgagaggctgcaggaggaacctgaa
gtcagatataaaggcttgcaggtgtcagagagagacctggaatacacgtatgtccgaccc
ggaggctccgactattctccacctccccccctgcctcggcctcctccccccggcctgaca
aatgagcacagtgatggcgggagccatggcgaccatggtggacgagggggcggggtcaac
cacggggttggcgtggtgggcctggctccagagcacatcgccacgccgggggcggccctg
agctggcaggccgccatcgatgctgcacggcaggcaaagatgatgggcaatgccgcttca
ggtggaggggcgggccttggttcgggagggggcgggcccatctccacggccagctccact
caacggaagagacaacactatagctccaagcctaagaaacagacaacgacgacagccaca
aggccgccacgggcactactctgtctcacactcaagaaccccattcgcagggcctgcatc
agcattgtagagtggaaaccattcgagatcattatcctgatgaccatcttcgccaactgt
gtggccttagccgtctacatccccttccccgaggatgattcgaacgccaccaactccaac
ctggaacgtgtggagtatctgttcctcatcattttcacagtggaggcgttcctgaaggta
atagcctatggcctgctcttccacccgaacgcctacctgaggaacggctggaatctactc
gacttcatcatcgtagtcgtagggttattcagcgcaatcttggagcaggccacaaaaggg
gacggtgccactccgattggagggaaagcggcaggctttgatgtcaaggctctgagggca
ttcagagtactcagacccctcagactggtgtcaggagtaccaagtttacaggtagtgttg
aactccataatcaaagccatggttcccctgctccatatcgccctgctggtcctcttcgtc
atcatcatctatgccattatcggcctggagctcttcatgggcaaaatgcacaagacctgc
gtccacgagcaaacaggcacctttgcagaggaaaagccagcaccttgtgcacccgatgga
gcttatggtcgacattgtgcacacaatggaacagagtgcaaaatggggtgggagggccca
aacgacggcatcaccaactttgacaactttgcctttgcgatgttaacggtgtttcagtgc
ataacaatggagggctggacggacgtgctatactggatgcaggatgctatgggctatgag
ctgccatgggtctattttgtgtctctcgtcatcttcggctccttttttgttctcaatctc
gttctgggggtgttgagcggagagttttccaaggagagggagaaggccaaggcacgcggt
gacttccagaagctcagagaaaaacagcaactggaggaagacctcaagggctatttagac
tggatcactcaggctgaagacattgacccagagaatgaggaggagggcttggatgatgac
aaacccagaaacctgagcatgccagcaagtgagaacgaatccgtcaacacagacaatgcc
cctgggggagatgtggagggtgagacctgctgtactcggctcgcaaataggatctccaaa
tccaagttcagtcgctattctcgaaggtggaacaggctatgcagaagaaagtgccgtgcg
ggagtcaaatcgcaagttttctattggctggtcatattcctggtgttcctcaacactctc
accattgcctctgaatatcaccagcagcctcagtggttaactgatatacaagacattgca
aataaggtgttgttagctctcttcactggtgagatgctgctcaagatgtacagtctcggc
ctacaggcctactttgtttcgctctttaaccgctttgacagcttcgtagtatgtggagga
atccttgagaccattctggtggagacgaagatcatgtctcctctcggcatctcagtgttg
cgttgtgtgcgcttgctaaggatcttcaaaataaccagatactggaactcactgtccaac
ctggtggcctccctgcttaactctgtccgctccatcgcttccctgttgctcctgctcttc
ctcttcatcatcatcttctctctcctgggcatgcagctctttggggggaaattcaacttt
gacgagaccagacgcagcacctttgacaactttcctcagtctctgctcaccgtgttccag
atcctaacaggagaggactggaactctgtcatgtatgatggcatcatggcatatggtggg
ccgtccttccccggcatgctggtctgcatctacttcatcatcctcttcatctgtggaaac
tatatcctgctgaatgtcttcttggccattgctgtggacaatctggcagacgctgagagc
ctgacatctgcccagaaagaagaggaagaggagaaggagaggaaaaaactggccagactc
gcgagcccagagaagcgtcaaaacaacgagaagccgcctctggaggtggagaagaaagag
aaaaaaaaagagaaaatagagctgaagtccatcacttcagacggagagaccaacaccgct
actaaaatcaacatggatgactactgtggagatgagagtgaggagaagaatccatatcct
gcaaatgattacataggagatgaagatgaggaggagccagagatgccggtgggcccgaga
ccacggccactctctgatattcaacttaaggagaaagctgttcccatgccagaggcccgt
gctttcttcatcttcagccacactaaccaattccgggttctgtgccataaaatcgtcaac
cacaacatcttcaccaacctcatcctcttcttcatcctgctcagcagcatcagtctggca
gcagaggaccctgtcaagaatgactcttttagaaaccggatcttgggctatgcagatcac
gtcttcactggactcttcactatagagatcattcttaagatgacagcctatggagccttc
ctccacaaaggttcattctgtagaaactatttcaacattctggacctggtggtggtcagc
gtgtccctcatctcctctggaatacagtcgagtgccataaacgtggtgaagatcctgaga
gttctgcgagtgctcagacctctacgggccatcaacagagccaagggactaaagcatgta
gtgcagtgtgtgtttgtggctattagaactatcggcaacatcgtcatcgtcaccacgttg
ctccagttcatgtttgcttgtattggagtacaactctttaagggcaagttcttcacttgc
accgacagctccaaacacactgaggcagagtgcaggggctcctacatcatgtataaggac
ggagacgtggggaagcctgaaagagcctcgagaatctgggaaaacagtgacttcaacttt
gatgacgtcctgcaaggcatgatggctctgtttgccgtgtctacttttgaaggctggcca
gggttactgtaccgggccatagattctcacgctgaggatgttgggcccatctacaactac
cgtgtggttatctccatcttcttcatcatctacattattatcattgccttcttcatgatg
aacatcttcgttggtttcgtcatcgtcacattccaggagcaaggagagcaagaatataag
aactgcgagctggacaagaaccagcgtcagtgtgtggaatacgccctgaaggctcgtcca
ttgcgccgctacatcccaaagaacccctaccagtacaaggtgtggtatgtggtcaactcc
acctactttgagtacctgatgttcacactcatcctcctaaacaccatctgtctggccatg
cagcatcatgggcagaccaaaaatttcaatgatgccatgaacatcctcaacatgctcttc
actggactcttcactgtggagatgatcctgaaactgattgccttcaagccaaggggatac
tttagtgatccctggaatgtgtttgatttcctcatcgtaattggcagcataatagacgtc
attctcagtgagattaacccagctgactcctcctcgtcctcgtcctcctcctcttcgtcc
tcctcctcctcttcctcttctcacccccctgtggtaaggccaatggtacgctccgacggt
aacctcgtccgcctccccacctcctctaccatccctccatccctccatccttccatccct
cctcctgctacgccgtccatgggactgcagaactctgaagagaacgccaggatctccatc
accttcttccggctgttccgcgtgatgaggctggtgaagctgctgtctcgcggggaaggg
attcggaccctgctgtggaccttcatcaaatccttccaagctctgccatacgtagctctt
cttatagtgatgctattcttcatatacgctgtcatcggaatgcagatgtttggtaagata
gcactgcgggaccacactcagatcaacaggaacaacaatttccagacgttccctcaggca
gtgctgctgctcttcagatgtgcaacaggtgaagcgtggcaggagatcatgctggcgtgc
tcaacctatcggccatgtgagaagggatcgacgaatgagaacagcacaaccaacgaggac
tgtggcagccagtttgcaatcatttactttgtcagcttctacatgctctgtgcctttctg
atcatcaacctgtttgtggccgtcatcatggacaactttgactacctgacgcgtgactgg
tcgattctggggccacatcatctggacgaattcaaaagaatctgggctgagtacgaccca
gaagctaaggggaggataaagcaccttgatgtggtgactctgctgcggagaatccagcct
ccccttggctttggaaagctttgtccgcacagggtggcctgcaagcgtctggtgtcaatg
aacatgcctctgaacagcgatggaacagtaatgttcaacgccacactgtttgccctggtc
agaactgcactcaggattaagacagatggcaacctagagcaagccaatgaggaactgagg
gcaatcgtgaagaagatatggaagagaaccagcatgaaactcttggatcaagtagtgccc
cctgctggtgacgatgaggtcacggtcgggaagttctacgctaccttcctcatacaagaa
tatttccgcaagtttaagaagaggaaagaacaagggcttgtggccaaggtgcctcccaaa
actgccctctctctgcaggcgggcctgcggacgttgcatgatattggtccagagattcgg
agggccatctctggagacctgactgtggaggaggagatggataaaggtctgaaggagccc
gtgtcggccgtttctgaggacgatatcttcagggtaaagcggacgggtgggttatttggc
aaccacgtcaactactacaaccagagcgatggccacggatctttcccgcagtccttcact
acccagcgtcctttgcatatcagccagaagggctcaccttgcgaaggtgaaagcccgtcc
catgagaagcttatggactcgaccaccttcaccccttcctcttactcctcatcaggctca
aatgccaacattaacaatgccaacaacactggcatggtcggcgttacaacccagggcatc
agtcgattcccaagtccgtctataagcactgtggacgggcacacaggacagccactcacc
cccatcctgctgccaagatctgcatggtgctttcctccaaagaggacgtgtttttatgac
aacctcatgcgctcggactcgagtgacagccatctgccaatcataagaagaggggaggag
tcaatggaggagacgtacgatgagagctacgtcgacgacagggagtaccacgaggatgac
cactcgctctcctctgacatgctagtgtatcaagatgaaacatgtaagcagttgactccc
atggaggaaggagaggaggtagaggaccgaagaggaggaggaggaggagggtggcagtct
cccagtgtcttcctctgccccacttctctggtgcggagatcatccttcaacctggagtgt
ctcaggagacagtcaaggccagacgtctcccagaagacggctgtacccttgcaccttgta
catcatcaggcactagcagtggcaggtttgagtcctctgctaaggaggagtcactcaccg
actctcttcagtcggctgtgctctacgcctccggccagtcccacagcccttagcagtgat
gcctcttatcagcgagtgccctttctgaggctagagggttctaactcccttgaaaagctc
aataccagcttgccctccgtcaactgtgggccctggtacagcgacagtaacgggaacagc
cgagggcctagtccaagtcctagtcccacccccggcggctcggtgtccaatcaaagacca
cctcggccggtgtcgctaacagtgccctcgctactgaggaaagactccagctcactgtct
catgggagtgcgggcagtctggtggaggcggtgctaatatcagagggtttgggtcatttc
gctcaggacccgtcattcatcgaggcaaccaaggccgagttggctgatgcctgtgacatg
accatcgaggaaatggagcaagccgcgaacaaccttctcaatggcagcacccccacaaac
accacgtccagcgcctcctctcactcacagaacagccccaatggcagcgtccttctccac
acagcagcaacagcaacagcaacagcaacagtgcacagggaccgagcagtcagcttgagt
cccagcgagggcgttggagaggcgggaggaagcagaagctccgtccatgggccatcctca
atggaggaacggcaggagctgctagcagaggagagaggacaagaagaggaggaggaggag
gaggaggaagaggaggaggaggaggaggaggaggaggaggaagtggtggtagagagggag
gaggaggaggagcaacatagaagctcagttgtaattggaggtacgcggcagaggaacagc
gggctgttggaggacgaagacatggagtgtgtgactagtttgtag
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integrated database retrieval system
