Solea solea (common sole): 131460142
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Entry
131460142 CDS
T10853
Name
(RefSeq) polyubiquitin-C-like
KO
K08770
ubiquitin C
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03320
PPAR signaling pathway
ssoe04120
Ubiquitin mediated proteolysis
ssoe04137
Mitophagy - animal
ssoe04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131460142
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131460142
04137 Mitophagy - animal
131460142
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
131460142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssoe04121
]
131460142
Ubiquitin system [BR:
ssoe04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
131460142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
TBK1_ULD
DUF2604
Rad60-SLD_2
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
131460142
NCBI-ProteinID:
XP_058486432
LinkDB
All DBs
Position
1:complement(36201992..36204634)
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AA seq
677 aa
AA seq
DB search
MQIFVKTLTGKTITLEVETSDTIENVKAKIQDKEGIPPDQQRIIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKT
ITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQVFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRSL
SDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLRLRGGMQVFVKTL
TGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQVFVKTLTGKIITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAYKQLED
GHTLSDYNNQKEFILHL
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaactctgaccggtaaaaccattaccctggaggtggagaccagt
gacacaattgaaaatgttaaggccaaaatccaggataaggagggcatccctccagaccaa
cagcgtataatctttgcaggcaagcagttggaagatggccgcaccctctccgactataac
atccagaaggagtcaaccctccatcttgtgctacgcctaagaggaggaatgcaggtattt
gtaaagaccctgactggcaagaccattacccttgaggtggagtccagtgacactattgaa
aacgtcaaggccaaaatccaggataaggagggcatccctccagaccagcagcgcctaatc
tttgctggcaagcagttggaagatgggcgcaccctctccgactacaacatccagaaggaa
tcaacccttcatcttgtgctacgcctaaggggaggaatgcaggtatttgtaaagaccctg
accggcaagaccattaccctggaggtggagtccagtgacaccattgaaaacgtcaaggcc
aaaatccaggataaggagggcatccctccagaccagcagcgcctaatctttgctggcaag
cagttggaagatggccgctccctctccgactataacatccaaaaggaatcaacccttcat
cttgtgctacgcctaaggggaggaatgcaggtatttgtaaagaccctgaccggcaagacc
attaccctggaggtggagtccagtgacaccattgaaaacgtcaaggccaaaatccaggat
aaggagggcatccctccagaccagcagcgtcttatctttgctggcaagcagttggaagat
gggcgcaccctctccgactataacatccagaaggaatcaactcttcatcttgtgcttcgc
ctaagaggaggaatgcaggtatttgtaaagaccctgaccggcaagaccattactctagag
gtggagtccagtgacaccattgaaaacgtcaaggccaaaatccaggataaggagggcatt
cctccagaccagcagcgcctaatctttgctggcaagcagttggaagatggccgctccctc
tccgactataacatccagaaggaatcaacccttcatcttgtgctacgcctcagaggagga
atgcaggtatttgtaaagaccctgaccggcaagaccattaccctggaggtggagtccagt
gacaccattgaaaacgtcaaggccaaaatccaggataaggagggcatccctccagaccag
cagcgcctaatctttgctggcaagcagttggaagatgggcgcaccctctccgactataac
atccaaaaggagtcaaccctccatcttgtgctacgcctaaggggaggaatgcaggtattt
gtaaagaccctgactggcaagaccattacccttgaggtggagtccagtgacaccattgaa
aacgtcaaggccaaaatccaggataaggagggcatccctccagaccagcagcgactaatc
tttgctggcaagcagttggaagatggccgctccctctccgactataacatccagaaggaa
tcaaccctccatcttgtgctacgcctaaggggaggaatgcaggtatttgtaaagaccctg
accggcaagaccattaccctggaggtggagtccagtgacaccattgaaaacgtcaaggcc
aaaatccaggataaggagggcatccctccagaccagcagcgcctaatctttgctggcaag
cagttggaagatgggcgcaccctctccgactataacatccaaaaggagtcaaccctccat
cttgtgctacgcctaagaggaggaatgcaggtatttgtaaagaccctgactggaaagatc
attaccctggaggtggagtccagtgacaccattgaaaacgtcaaggccaaaatccaggat
aaggagggcatccctccagaccagcagcgactaatctttgcttacaagcagctggaagat
ggccacaccctttccgactacaacaaccagaaggagttcatcctccatctttag
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