KEGG   Solea solea (common sole): 131469038
Entry
131469038         CDS       T10853                                 
Symbol
col9a3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
ssoe  Solea solea (common sole)
Pathway
ssoe04510  Focal adhesion
ssoe04512  ECM-receptor interaction
ssoe04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ssoe00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    131469038 (col9a3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    131469038 (col9a3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    131469038 (col9a3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ssoe00535]
    131469038 (col9a3)
Proteoglycans [BR:ssoe00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   131469038 (col9a3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 131469038
NCBI-ProteinID: XP_058499852
LinkDB
Position
11:4520148..4538641
AA seq 678 aa
MTVFSALWVLLLCQLLTSSSAQRPGPRGAPGPPGPPGPLGKDGTDGKDGPAGLPGKAGSK
GKAGIPGSPGKPGLPGLPGVDGLTGPDGPAGTDGPAGEAGEAGPPGPAGPPGRGRSGAPG
LPGTNGFPGGVGPQGPVGGEGASGLPGPPGPDGPPGFPGTLHDLNGDLLCPAICPPGPPG
PPGMPGFKGHTGHKGDKGELGKDGEKGDGGPPGPPGIAGTVGLQGPRGLRGLQGPMGAVG
DRGLTGFRGKPGVAGIIGKTGDGGEKGPYGFKGPKGEIGKIGPKGGPGGSGPKGEPGMPG
RDGKDGTPGLDGEKGDAGRHGTVGEKGPNGLPGLQGKAGVNGSKGETGDAGASGETGPSG
EPGIPGDIGVPGERGIAGPRGVAGGIGPAGNAGPQGGKGYQGGKGALGDPGLPGPTGIRG
EFGERGPVGASGAKGDMGVAGSDGLPGENGEPGHFGPVGQKGESGKHGELGPKGVTGPQG
ELGARGPPGKQGPMGFQGEQGIPGFAGRTGVPGKLASEQHIRELCGSLIDGEIAQLAANL
RRPLAPGMVGRPGPSGSPGQPGVVGSIGHPGSRGPPGYRGLPGELGDSGPRGDVGEPGDK
GSLGKAIDGPSGDQGQQGLPGVPGIVKDGRDGSAGDPGEPGEAGRVGRTGHRGPPGICDT
SACHGPTVVGKTSNPKNH
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgacggtgttctctgctctttgggtgctcttactgtgccagcttttgacatcatcctca
gcgcagaggccgggacccagaggagctcctgggccaccagggccgccaggaccactgggg
aaggatggcactgatggcaaagatggacctgctggtcttccagggaaagcaggttccaaa
gggaaagcaggaataccaggatctccagggaaaccaggtctgccaggacttccaggggtg
gatggtttgacgggtcctgatggtcctgctgggacggacgggcctgcaggagaagcaggt
gaagctggacctcctggacctgctggacctcctggcagagggagatcaggagctcctgga
ctccctggaaccaatgggtttccaggtggcgttggaccccagggtccagtgggtggtgaa
ggtgcttcaggacttcctggacctcctggtcctgatggacccccaggttttcctggtact
cttcatgacctcaacggtgaccttctgtgtcctgcaatctgtccccccggcccccctggt
cctcctgggatgccaggattcaagggtcacacgggacacaaaggagacaaaggagagctt
ggaaaagatggagagaagggtgacggtggtccacctggtccaccaggtattgccggcact
gtgggtctgcagggcccacgtggtctgagaggtttgcagggtcctatgggagctgtagga
gacagaggtctgactggtttcagaggcaagcctggtgttgccggcatcatcggaaagaca
ggtgatggcggtgaaaagggaccatatggatttaaaggacccaaaggagaaattggtaaa
attggtcccaaaggaggtccaggaggatcaggacccaaaggggagcctggaatgcctggc
agagatggcaaagatggtacaccaggattagatggcgagaagggtgatgccggacgccat
ggtacagttggagagaaaggaccaaacggtcttcctggtctacaaggaaaagctggtgtc
aatgggtctaaaggagaaactggtgatgcaggcgcatctggggagacgggaccctctgga
gagccaggtattcctggtgatattggcgtcccaggagagcgggggatagccggacccaga
ggagtggctggaggcatcggaccagcaggaaacgctgggcctcagggagggaaaggatat
cagggaggaaaaggagctttaggggatccaggtctcccaggtccaacaggaatccgtgga
gagtttggtgaaaggggtccagttggagcttcaggagctaaaggagatatgggtgtggca
ggaagtgacggtttaccaggagagaatggagaacctggtcactttggaccagttggacaa
aaaggagagtcaggaaaacatggagaactgggaccaaagggcgtgacaggtccacaggga
gagcttggagcaagagggcctccagggaaacaagggccaatgggcttccagggggaacag
ggaataccaggatttgcgggaaggacaggtgtacctggtaaactggcgagtgagcagcac
atcagagagctgtgtggctccttgatcgatggtgagatcgcacagttggctgctaacctc
cgaagacccctggctcccggtatggtcggccgcccgggcccctctgggtctccaggacaa
ccgggagttgttggctctattgggcatccaggttcccgtggaccaccagggtacagaggc
ctgccaggagaacttggagactctggtcccagaggtgatgttggtgaaccaggtgacaag
ggatccctcggcaaagccatcgacgggccatctggagaccagggacaacaaggtcttcca
ggagtacctggaatagtcaaagatggtcgcgatggatctgcaggagatccaggtgagcct
ggcgaggcgggcagggtgggtaggaccgggcaccggggacctcctggaatctgtgacaca
tcagcctgtcacggaccaacagtcgtcggaaaaacctccaaccccaaaaaccattag

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