Solea solea (common sole): 131471820
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Entry
131471820 CDS
T10853
Symbol
phf1
Name
(RefSeq) PHD finger protein 1 isoform X1
KO
K11467
PHD finger protein 1
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
131471820 (phf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssoe03000
]
131471820 (phf1)
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131471820 (phf1)
Transcription factors [BR:
ssoe03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
131471820 (phf1)
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
131471820 (phf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_ash2p_like
PHD_2
Chromo
ASH2L-like_WH
DUF4537
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
131471820
NCBI-ProteinID:
XP_058504572
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All DBs
Position
13:complement(24554459..24580081)
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AA seq
554 aa
AA seq
DB search
MGGVSEGDDVLARWSDGLLYLGNVKRVDGVKQCCLVRFEDNSEFWVLRKDIHTFAAGVEE
VCCICDAPPLKEPLINCLKCRHGFHPECHTPAIEPEADSDSWICRQCVFAVATKRGGALK
RGRFARLMQFMKLRLPYQLSSLDWDPQHLTNQQQCYCYCAGPGEWNLKMLQCGSCGQWFH
EACTQCLTKPLLYGDRFYQFQCSVCTKGPETIQRLPMTWVDLAHLVLYHLSLCCKRKYFD
FDHEILSFTNENWDSLLLGALSDTPKQDRCHNLLNALNSHKDRFVSGKEIKKKKCLFGLQ
VRAPPPLTSDSSPLITEPPINITHRRSPLSLPCQRRVTGSESRKSKRRIIETQACPPPVP
ANPIELLPCCHGYMGGANLYNSRKSEEELSLSSAPKRMYGCYHSSYNGNAALSRTLHHYN
SMEDTCRLPPPCLPYPLSSNGSHHHHHHHHLHQHHHNHQHQLQHQPGQKQLEPLILRDLP
PYQDGMGGGGGVEGGGGGGGGGGGGGGGGVGVGGGSGTVARSWGGGEAVRILARRVTPDG
KVQYLVEWENVGLY
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggggggagtaagtgaaggagatgatgtgttggctcgatggagtgatggactactgtac
ctcggcaatgtgaaaagagtggacggagtcaagcaatgttgtctggtgaggtttgaggac
aactccgagttctgggtgctgaggaaggacattcacacgtttgctgctggagtggaagaa
gtttgctgtatttgcgacgctccgcctcttaaagaacccctcataaattgtctcaaatgt
cgccacggttttcatccagagtgccacacgccagccattgaaccggaagccgacagcgat
tcgtggatatgtcggcagtgcgtctttgccgtcgcaaccaagagaggcggggccctcaag
cggggacgcttcgcccgactcatgcagttcatgaaactccgactcccgtaccagctgtcg
tctttggactgggacccgcagcatctgaccaatcagcaacagtgttactgctactgtgcc
ggacctggagagtggaacctaaagatgctgcagtgtggaagctgtggtcagtggttccac
gaggcctgtacacagtgtctgaccaagcctttactgtatggagacagattttaccagttc
cagtgttctgtgtgtacaaagggaccggagacgatccaaagacttcccatgacctgggtg
gatttggctcacttagtgctctaccatctctcactgtgctgcaagaggaagtactttgat
tttgaccatgaaatcctgtccttcaccaatgagaactgggactcgttgctcctgggcgcg
ctctccgacacgccgaagcaggaccgctgtcacaatctcctcaacgctctgaactctcac
aaggacagatttgtatccggcaaggagatcaagaagaagaagtgtcttttcgggctgcag
gtccgagctccgcctccgctgacgtccgactcgtctccgctcatcaccgagccgcctatc
aacatcacacacaggagaagcccgctgtcactgccctgccagaggagagtgacggggtcc
gagtcgcgtaaatcaaagcgacggatcatagagacacaggcttgtccacctccagtccct
gccaaccccattgagctgctgccatgttgccatggttatatgggaggggccaacctttac
aactccaggaagtcagaggaggagcttagtctgagctctgcccccaagcggatgtacggc
tgctaccacagctcttacaatggaaacgctgcactgtccaggactctccatcactacaac
agcatggaggacacttgcaggttaccaccaccctgcctcccgtaccccctcagctccaat
ggcagccatcaccaccaccaccaccatcacctccatcagcaccatcacaaccaccaacac
cagctacaacaccagccggggcagaagcagctggagcccctcatcctgcgcgacctgcct
ccttaccaggacggcatgggcggaggtggcggtgtagaaggaggaggaggtggtggcgga
ggaggaggaggaggtggaggggggggggtgggagtcggaggtggcagtgggacagtggcc
aggagctggggcggaggggaggctgtgaggatcttggcgagacgcgtgacaccagatggg
aaggttcagtacctggtggagtgggagaacgtgggtttgtactga
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