Streptomyces solisilvae: I1A49_22550
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Entry
I1A49_22550 CDS
T07406
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
ssoi
Streptomyces solisilvae
Brite
KEGG Orthology (KO) [BR:
ssoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssoi03021
]
I1A49_22550
Transcription machinery [BR:
ssoi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I1A49_22550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
Sigma70_ECF
HTH_24
MarR
DUF7343
Motif
Other DBs
NCBI-ProteinID:
QPI57323
LinkDB
All DBs
Position
5620356..5621186
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AA seq
276 aa
AA seq
DB search
MSVELGSSKVLNNDAPLMPDDCDAIDTRTLSRSLFLRLATLDKDSAEAGYVRDTLIELNL
PLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMPTVVGEIKRFFR
DTSWSVRVPRRLQELRLALTKASDELSQKLDRSPTVTELAAALGVSEEDVVDGLAVGNAY
TASSLDSPSPEDDGGEGSLADRLGYEDTALEGVEYRESLKPLLAKLPPRERQIIMLRFFA
NMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLISD
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtagaactgggcagctcgaaggtgctcaacaacgacgcaccgctcatgcctgac
gactgcgacgccatcgacacccgcaccctctcccgctccctcttcctgcggctcgccaca
ctcgacaaggacagtgcggaggccggctacgtccgtgacaccctcatcgagctgaacctc
ccgctcgtccgctacgcggcggcccggttccgcagccgtaacgagcccatggaggacatc
gtccaggtcggcaccatcggcctgatcaaggcgatcgaccgcttcgactgcgaacggggc
gtggagttccccacgttcgccatgccgaccgtcgtgggcgagatcaagcggttcttccgc
gacaccagttggtcggtgcgggtcccgcggcggctccaggagctgcggctggcgctcacc
aaggccagtgacgagctgtcacagaagctcgaccgctccccgaccgtcacagagctcgcc
gcggcgctgggcgtctccgaggaggacgtggtcgacgggctcgcggtgggcaacgcctac
acggccagctcgctggactccccgtcgcccgaggacgacggcggcgaggggtcgctcgcc
gaccggctgggctacgaggacaccgcgctggagggcgtggagtaccgggagtcgctcaag
cccctgctggccaaactgccgccgcgcgagcgccagatcatcatgctgcgcttcttcgcc
aatatgacgcagtcgcaaatcggcgaagaggtcgggatctcccagatgcatgtctcccgg
ctgctcacccgcaccctggcccagctgcgcgagggtctgatctcggactga
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