Staphylococcus saprophyticus: SSP0005
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Entry
SSP0005 CDS
T00269
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ssp
Staphylococcus saprophyticus
Brite
KEGG Orthology (KO) [BR:
ssp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssp03032
]
SSP0005
03400 DNA repair and recombination proteins [BR:
ssp03400
]
SSP0005
Enzymes [BR:
ssp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SSP0005
DNA replication proteins [BR:
ssp03032
]
Prokaryotic type
DNA Topoisomerases
SSP0005
DNA repair and recombination proteins [BR:
ssp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SSP0005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
TOPRIM_C
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BAE17150
UniProt:
Q4A176
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All DBs
Position
5173..7098
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AA seq
641 aa
AA seq
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MSDVNNTEDYGAGQIQVLEGLEAVRKRPGMYIGSTSEKGLHHLVWEIVDNSIDEALAGYA
DTIEVVIEKDNWIKVTDNGRGIPVGIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGGLH
GVGSSVVNALSEDLEVYVYKDRKVYHQGYKKGVPQFDLKVIEETDDDNTGTVIRFKADSE
IFTETTTYHYETLQQRTRELAFLNKGISITLRDERGEEVREDTYHYEGGIKSYVEMLNEN
KQPLHEEPIYVHQTKDDIEVEIALQYNKGFATNLLTYANNIHTYEGGTHEEGFKRALSRV
LNSYGLNSKIIKEDKERLSGEDTREGLTAIVSIKHGDPQFEGQTKTKLGNSEVRQIVDKL
FSELFERFLYEHPQVGRIVVEKGIMASHARLAAKKAREVTRRKSALEISSLPGKLADCSS
KDPSRSEIFIVEGDSAGGSTKSGRDSETQAILPLRGKILNVEKARLDRILNNNEIRSMIT
AFGTGIGGEFDLSKARYHKIVLMTDADVDGAHIRTLLLTFFYRFMRPLLEAGYVYIAQPP
LFKLTQGKQKYYVFNERELEKLKAELEPTPKWSISRYKGLGEMNADQLWETTMNPENRAM
LQVSLDDAIEADQVFEMLMGDVVENRRQFIEDNAVYANLDF
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagatgtgaacaacacggaagattatggtgctggacagattcaggtattggaaggt
ctagaagcggtacgtaaaagaccaggtatgtatattggttcaacttcagaaaaaggttta
caccatcttgtatgggaaattgtcgataacagtatcgatgaagcacttgcaggttatgcc
gacacaattgaagttgtaatcgaaaaagataattggattaaggtaacggataatggccgt
ggtatacctgttggcattcaagaaaaaatgggacgtcctgcagttgaggttattctaact
gtattacatgctggtggtaaattcggtggcggcggttataaagtttctggtggtttacat
ggtgtaggttcatcagtagtaaacgcgttatcagaagatcttgaagtatacgtgtataaa
gaccgcaaagtttatcatcaaggttataaaaaaggtgtacctcaatttgacttgaaagtc
attgaagaaacagatgatgataatacaggtacagtcattcgttttaaagcggattctgaa
attttcacagaaacgacaacatatcattatgaaacattacaacaacgtacaagagagctt
gcgttcctaaataaaggtatttcaattactttaagagatgaacgtggtgaagaagttcgt
gaagacacatatcactatgaaggtggtattaaatcttatgttgaaatgctaaatgaaaac
aaacagcctttacatgaagaacctatttacgtgcatcaaaccaaagatgatattgaagtt
gaaattgctttacaatacaacaaaggttttgcaacaaacttgttgacgtatgcgaataat
attcacacatatgaaggtggtacacacgaagaaggtttcaaacgtgcactatctcgtgta
cttaatagttacggattaaatagtaaaattatcaaagaagataaagaaagactttcaggt
gaagacacacgtgaaggtttgacagcaattgtttcaattaagcacggtgatccacaattt
gaaggacaaacaaaaacaaaattaggtaactctgaagtacgtcaaatcgttgataaacta
ttctctgagttatttgagcgtttcttatatgaacatcctcaagtaggccgtattgtagtt
gaaaaaggtatcatggcttcacacgcacgccttgctgcgaaaaaagcacgtgaagttacg
cgccgtaaatcagcattagaaatatcaagcttacctggtaaattggcggattgctctagt
aaagacccatcacgtagtgaaatctttatcgtcgagggtgactctgccggtgggtctaca
aaatccggtcgtgattcagaaacacaagcgatattgccattgcgtggtaaaatcttgaac
gttgaaaaagcacgtttagatagaattttaaataataacgagattcgttcgatgattacg
gcatttggtacgggtattggtggcgaatttgatttaagtaaggcacgctatcataagatt
gtccttatgacagatgctgatgtcgatggtgcacatattagaacattgttattaacattc
ttctatcgctttatgagaccattattagaagcaggatatgtgtatattgcacaaccacct
ttattcaaattgacacaaggtaaacaaaagtactatgtctttaatgaacgtgaattagaa
aaacttaaagctgagttagaaccaacgccaaaatggtcgatttcacgttacaaaggtctt
ggtgaaatgaatgcggatcaattatgggaaactactatgaatccagaaaatagagccatg
ttacaagtatcattggatgatgcgattgaagcggaccaagtcttcgaaatgttaatgggc
gacgttgtagagaaccgtagacagtttattgaagataatgcagtctatgccaacttagat
ttctaa
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