Salvia splendens (scarlet sage): 121741379
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Entry
121741379 CDS
T07627
Name
(RefSeq) pumilio homolog 1-like
KO
K17943
pumilio RNA-binding family
Organism
sspl
Salvia splendens (scarlet sage)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NABP
PUF
Motif
Other DBs
NCBI-GeneID:
121741379
NCBI-ProteinID:
XP_041990036
LinkDB
All DBs
Position
7:9260584..9267077
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AA seq
1039 aa
AA seq
DB search
MLSELGRRPMIGNNENSFGDEYEKEIGFVLREQRRQEADDLEKELNLYRSGSAPPTVDGS
LSAVGGLFNHSGGAGGPAFTDFTENSGNEFMSEEELRSDPAYLSYYYSNVNLNPRLPPPL
ISREDWRFSQRFQGGSSAIGDRRKVNRDDSGNGGRSMFPSSHNLNSNKQEAEGMDRMQGH
VEWGSDGLIGLPGLGLGSKQKSLVEIFKDDFNRATPDSTHPSRPASRNAFDENANALSSA
EAELAHLYGDFTSSDTLLSASNTHSSTGAQHGGGPTSYSYAAALGASLSRSSTPDPQRIA
RAPSPCPTPIGGGRAGNSEKRSINNASSFGGVSSHSKDTADLVAALSGVNLSNGVMDEEH
HLSPHNEPNADGHNNYLFNAQGGQNNVRQHMYKKKHELGQSNMSSAPQPANISTSDSVLN
NGYVSHVSNNAYIRAELQKNGVPSNHSFRKGSSNAAVSGGGGLLHQFLDSPNSSFSNYGS
GYPMSPISGQLGSPNLPPLFENAAASALAASGMDSRMLGGSNNIPELNLGRIGSQMTGSM
QQAPFVDPLYLQYLRTAEFSAAQVAALNDQPVNRNYLGESYFDLLQKAYLGNLLPGQNSE
YGVPLGGKTGVSSPHGYYGNPAFGLGMSYPGSPLGSPAISNSVGGPGSPIRHGDFNMRYP
GGLRNAAGSTIGPWHLDPSFSSSLLEEFKSNKARCFELSEITGHVVEFSADQYGSRFIQQ
KLETATTEEKCMVFDEIFPRALTLITDVFGNYVVQKFFEHGLPSQRRELAGKLFGHVLNL
SLQMYGCRVIQKAIEVIDVDQKIKMVEELDGHVMRCVRDQNGNHVIQKCIECVPEEHIQF
VVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDESTQMKVMEEIMGSVSMLAQDQYGNYVVQ
HVLEHGKPHERTTIIQELAGKIVEMSQQKFASNVVEKCLTFGDPSERQFLVTEMLGTTDE
NEPLQAMMKDQFANYVVQKVLETCSDQERELIMCRIKVHLNALKKYTYGKHIVARVEKLV
AAGERRIAAAAAAHTQKAA
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctgaattgggtagaaggccgatgattggaaataatgaaaattcgtttggagat
gagtatgaaaaggagataggttttgtgcttcgtgaacagcggaggcaagaggctgatgat
cttgagaaggagctgaatttgtataggagtggatcggctccacctactgtggatggttca
ctgagtgcagttggtgggttgttcaaccacagtggtggtgcgggtggtccggcttttact
gatttcacggaaaacagtggcaatgagttcatgtctgaggaggagcttaggtctgatcct
gcttatttgtcttattattactcgaatgtcaatttgaacccgaggctgccaccacctctg
atctcgagggaggattggcgattttctcagaggtttcaaggggggagttctgcaattggt
gataggaggaaggtcaatagggatgatagtggcaatggtgggagatccatgtttccgtcg
tcgcataatttgaactccaacaagcaggaggctgagggaatggacagaatgcagggtcat
gtggagtggggcagtgatggactgattggattgcctggattaggattgggtagcaaacaa
aagagtcttgtagagatatttaaggatgactttaaccgtgctactccggattctacacac
ccttcaagaccggccagcagaaatgcctttgatgagaatgccaatgctttgagctcagca
gaagccgagctggctcatctgtatggagatttcacatcctcagacacattactctcagct
tcaaatacgcacagttccacaggtgctcagcatggtggaggacctacttcatattcttat
gctgctgctttgggtgcatccttgtcaagaagctcaacaccggatcctcaacgaattgca
agagctcccagcccttgcccaactcctattggtggaggcagggccggaaattctgaaaaa
agaagcattaataatgccagctcctttggtggggtatcttctcactcaaaggatactgct
gatctggttgctgccttatcaggagtaaacctctcgaatggcgttatggatgaggagcat
catttgtcccctcataatgagcctaatgcagatggtcacaataactatctttttaatgcg
cagggaggccaaaataatgttagacaacatatgtataagaaaaaacacgaacttgggcag
tcaaatatgtcttctgctcctcaaccagcaaatataagcacctctgactctgttttaaac
aatggttatgtatcacatgtcagtaataatgcttatattcgggctgagcttcagaagaat
ggtgttccttcgaatcactcattcaggaaaggatcttctaatgctgcagtgagtggtgga
ggtggcttacttcatcagtttttggatagtcccaattcatccttttcaaattatggaagt
ggctaccctatgagtccaatatctggtcaacttgggagccccaatttgcctccactgttt
gagaatgctgctgcatctgctctggctgcatctggaatggactccagaatgttgggagga
tctaataatattcccgagttgaatctgggaagaataggcagccagatgactgggagtatg
cagcaggcaccttttgtcgaccctttgtatctccagtacttgaggactgctgaattctct
gcagcacaagttgcagctcttaatgatcaacctgtcaataggaactacttgggtgagtca
tattttgacctgcttcagaaggcctatcttggaaatttgttgcctggtcagaattcagag
tatggtgttcccctgggtggaaaaactggtgtgtctagtcctcatggttactacgggaat
cctgcttttgggcttggaatgtcatatcctggaagtcccttgggtagcccagctatttcc
aattcagttggaggacctggtagccctattaggcatggtgacttcaatatgagataccct
ggtgggctgagaaatgcagctgggagtaccattggaccctggcacttggatcctagcttc
agctcttctttgctggaagagttcaagagcaataaagccagatgctttgagctttcagag
atcactggtcatgttgttgagttcagcgctgatcaatatggaagccgattcattcaacaa
aagcttgaaactgctacaacagaagagaagtgcatggttttcgatgaaatttttcctcga
gctctgacattaattactgatgtgtttggtaattatgtagtacaaaagttttttgaacat
ggcctgccatctcaaaggagagaattagctggtaagctttttggacatgtactgaaccta
agcctccagatgtatggttgccgagtaatacagaaggcaatagaagttattgatgttgat
caaaaaatcaaaatggtggaagagctggatgggcatgtaatgcgatgtgttcgtgatcaa
aatggaaatcatgttattcagaagtgcattgagtgcgtccctgaggagcacattcagttt
gttgtgtcaacattttttgaccaagttgtgactctctctactcatccatatggctgtcgt
gtaatccagagagttctcgagcactgtaaggatgaaagcacccagatgaaagtgatggaa
gagattatggggtccgtaagcatgctggcacaggatcagtatgggaattatgttgttcag
catgtactggagcatgggaagccacatgagcgaacaactataattcaggaattagctgga
aagatagttgagatgagccagcagaaatttgcatcaaatgttgtcgagaaatgcttgact
tttggtgacccaagtgaacgccagtttctggtgactgagatgcttggcactactgatgaa
aatgaaccccttcaggctatgatgaaagatcagtttgcaaactatgtcgtacagaaagtg
ctcgagacatgtagcgatcaggagcgtgaactgatcatgtgtagaattaaggtccatctg
aatgcactgaagaagtacacctatgggaagcatatagtagctcgtgtagagaaacttgtt
gctgctggggagaggagaatagctgctgctgccgctgctcacacccaaaaggctgcgtag
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