KEGG   Salvia splendens (scarlet sage): 121755081
Entry
121755081         CDS       T07627                                 
Name
(RefSeq) sm-like protein LSM2 isoform X1
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03018  RNA degradation
sspl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121755081
  09123 Folding, sorting and degradation
   03018 RNA degradation
    121755081
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sspl03019]
    121755081
   03041 Spliceosome [BR:sspl03041]
    121755081
Messenger RNA biogenesis [BR:sspl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     121755081
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     121755081
Spliceosome [BR:sspl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    121755081
 Complex C
  U2 snRNP components
    121755081
SSDB
Motif
Pfam: LSM SM-ATX DUF150_C
Other DBs
NCBI-GeneID: 121755081
NCBI-ProteinID: XP_042006300
LinkDB
Position
11:complement(18394711..18396421)
AA seq 101 aa
MVFCLFNLHLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYP
HMLSVRNCFIRGSVVRYVQLPPEGVDVELLHDATRREARGG
NT seq 306 nt   +upstreamnt  +downstreamnt
atggttttctgtctcttcaatttgcatttgttcttctcgtatttcaaggatttggtgggg
agggaagtgacggtggaattgaagaacgatttagcgattagagggactctacattcggtt
gatcaatatctcaacattaagctggagaatactagggttgttgatcaggacaagtacccc
catatgctttcagtgcgaaactgcttcattcgaggatctgtcgtccgatacgtccaattg
ccacccgagggagttgatgttgagcttctgcatgatgccactagaagagaagcacgaggg
ggttaa

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