Salvia splendens (scarlet sage): 121755571
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Entry
121755571 CDS
T07627
Name
(RefSeq) protein transport protein Sec24-like At3g07100 isoform X1
KO
K14007
protein transport protein SEC24
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121755571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121755571
Membrane trafficking [BR:
sspl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121755571
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
HVO_2753_ZBP
Sen15
VWA
Motif
Other DBs
NCBI-GeneID:
121755571
NCBI-ProteinID:
XP_042006824
LinkDB
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Position
1:45464769..45473786
Genome browser
AA seq
1079 aa
AA seq
DB search
MGPENPNRPNYPLRPAATPFASQQSSTPFSSSGPAVGSEAPVFRPGPPAASNFQAPPFAG
GPLVGTEIPAFRPPPSIRPGEVVRPPPPPSYGPPTSGFQRFPNPPMSSAGQVPPPHISLT
GQPVIAPPTRPPPGPASPFSHPQPPLVSMGSPPQSIKTGQPNPNIPPPADQRFSTPIPRP
SSQPSSPPTGTSYPAGRGTYPGYANMQPNSVSQAPPMPPASFQMQQGGYGPPMQSSFPLQ
RGYAPQAPPTSLLAQQRGYAPVPPVSTSSGLYSGNQFQQHGIAPAHQGLAEDFSSLSLGS
VPGSYDAGLDITALPRPLDGDVEPKSYADMYPMNCDSRFLRLTTSGIPNSQSLASRWHLS
IGAVVCPLAETPPGEEVPIVNFATTGIIRCRRCRTYVNPYVAFTDNGRKWRCNICSLLND
VPSDYFAHVDASGRRVDLDQRPELIKGSVEFIAPAEYMVRPPMPPLYFFLIDVSISAVKS
GMLEVMSQTIKSCLDSLPGSTRTQIGFITYDSTIHFYNMKSSLAQPQMMVVSDLDDIFVP
LPDDLLVNLSESRSVVEAFLDSLPSMFQENMNVEAAFGPALRAAFLVMSQLGGKLLIFQN
SLPSLGAGLLKLRGDDIRVYGTDKEHTLRLPEDPFYKQMAADFTKYQIAVNVYAFSDKYT
DIATLGTLAKYTGGQVYYYPNFLASIHKEKLKHELTRDLTRETAWEAVMRIRCGKGVRFT
SYHGNFMLRSTDLLALPAVDCDKAYAAQLSLEETLLTTQTVYFQVALLYTSSSGERRIRV
HTAAAPVVTDLGEMYRLADTGAIISLFSRLAIEKTLSSKLEEARNSVQHRIVKALREYRN
LYAVQHRLSGRMIYPESLKFLPLYGLALCKSLPLRGGYSDVQLDERSAAAYTMMALPVKS
LLKLLYPNLVRVDECLVKVSLLHSCFFCWSVIWCASYLFPMSPQNEEFDTKKRLPLTVES
LDTRGLYIFDDGFRFVIWFGKALSPDITKNLVGEDFATDFSKVSLSQRDNPMSRKIMEIL
NQCRKSDPSYFQLCHLVRQGDQPREGFFLLTSLVEDQIGGANGYADWMVLLFRQVQQNA
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggggcccgaaaatcctaatcgtccaaactatccattaagaccagctgcaacacccttt
gcttctcagcaatcttcaacacctttctcatcgtctggtcctgctgttggatcagaagca
cccgtctttaggcctgggcctcctgcagcctcgaactttcaagcacctccctttgctggg
ggacctttggttggaacggagatccctgcctttagacctcctccatcaattagacctggt
gaagtggtccgcccacctcctccaccatcttatggcccacctacctcaggatttcagaga
ttcccaaacccccccatgtcgtcagctggtcaagtaccacctcctcacatctctcttaca
ggtcagcctgttatagctccaccaaccagacctcctccaggtcctgcttctcctttttca
catccccagccacctttggtatccatgggatctccacctcaaagcataaaaactggacaa
cctaacccaaatatcccacctcctgcagatcaacgcttctctactcccattcccaggcca
agttcccagccttcttctccaccaactgggacatcttatccagctggcaggggtacctat
ccagggtatgccaacatgcaaccaaattctgtttcccaagctccacctatgccgcctgcc
tcctttcaaatgcaacaaggaggttatggtccacctatgcagtcatcctttcctttacaa
cgaggctatgctccacaagcacctccaacatctcttctagctcaacaaagaggttatgct
cctgttccacctgtttcaacttcttctggcctctattcagggaaccagttccagcaacat
ggcattgcacctgctcaccagggtttggctgaagattttagttcgctctctcttggatca
gtaccaggatcttatgatgcaggacttgatatcacagccttaccaaggccattagacggt
gatgtggaacctaagtcttatgctgatatgtacccaatgaattgtgattctagattcttg
cgactaacaacaagtggcataccaaattctcaatcattggcatcacgatggcatttgtct
attggggctgttgtttgccctctagcagaaactcctcccggggaggaagttccaattgtt
aattttgccacaacaggaatcattagatgtagaaggtgccgtacttatgtgaacccatat
gtcgcgttcactgacaatggaagaaagtggagatgcaatatatgctcattgctaaatgat
gttccaagtgattattttgcccacgtggatgctagtggaagaagagttgatttggatcaa
aggcctgaacttataaagggtagtgttgagtttattgctccagctgagtacatggtccgc
cctccaatgccaccactctattttttcctcatcgatgtatcaatatctgctgttaaaagc
ggaatgcttgaggttatgtcacagactattaagtcttgcctggacagcttacctggttca
acacgaacacagattggctttataacttatgatagcaccatacatttctataacatgaag
tcatcattggcacagcctcagatgatggttgtctcggatttggatgatatatttgttcca
ttaccagatgatcttctagtcaacttgtcagaatctaggagtgtggtggaggcattcctt
gatagcttgccctccatgttccaggagaacatgaatgttgaagctgcatttggtccagct
ctcagagctgcattcttggttatgagccaacttggcggtaaattgttaatcttccagaat
agtctaccatctcttggtgctggcctcctgaagctgcgtggggatgatattcgagtttat
gggactgataaagagcatactttacgattacctgaagatccattttataaacagatggct
gctgattttactaagtatcagatagctgtaaatgtatatgcattcagtgataagtacacg
gatatagcaactttgggaacactggcaaagtatactggcggtcaggtgtattattatcca
aatttcctggctagtatccataaagaaaagttgaaacatgagctaaccagagatcttacc
agagaaactgcatgggaagcggtcatgaggataagatgtggaaaaggagtacggtttaca
tcttatcatggaaattttatgctaagatccacagacttactcgcactccctgctgttgac
tgtgataaggcttatgcagcacagttgtctcttgaagagacgctgttgactactcagact
gtgtactttcaagttgcactattatacacatcatcttctggcgaacggcgtatcagagta
cacactgcagctgctccagttgttacagatctgggagagatgtaccgcctagctgacact
ggagcaattatttctctgttctccaggctagcaattgaaaagactttgtcatccaagctg
gaagaagctcggaatagtgttcaacatcgtattgtcaaagctctaagggaataccgaaat
ctttatgctgttcaacatcgcttgtcaggaaggatgatctaccccgagtcactaaaattc
ttaccgttgtatggactagcattgtgtaaatcactacccctccgtggtgggtattccgat
gtgcagcttgatgagcgcagtgcagctgcatacaccatgatggctttacctgttaaaagt
ttgctgaaacttctgtatcccaacctggttcgtgtggatgagtgtcttgtaaaagtaagt
ttattgcattcttgtttcttttgttggagtgtgatttggtgtgcatcttacctattccct
atgtctcctcagaatgaagaatttgacaccaaaaagaggcttccactaaccgtagagagc
ttagacaccagaggtctctatatctttgatgatggtttccggtttgtcatatggtttggc
aaagcactttcacctgacataactaagaatttggtcggggaagattttgccacggacttc
tcaaaggttagcctctcccaaagagacaaccccatgtctagaaagatcatggagatcctt
aatcaatgtaggaagagcgatccgtcatattttcagctatgccatcttgtgaggcagggt
gatcaacctagagaaggcttcttcctacttacaagtcttgtcgaggaccagattggtggt
gccaatggttatgctgactggatggtgctgctttttcggcaagtccaacaaaatgcataa
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