Salvia splendens (scarlet sage): 121760042
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Entry
121760042 CDS
T07627
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121760042
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121760042
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
121760042
NCBI-ProteinID:
XP_042011580
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Position
13:33904145..33910337
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AA seq
499 aa
AA seq
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MLPQFSILLVCIFFLSLFSFTSSQNLSLPHQHPDPEAVVQHVQRSVNASFSRRHQLLSAP
IPTGIAQCLTGNPIDDCWRCDPNWGSNRQRLADCAIGFGRAALGGKGGRYYVVTDSSDRD
AANPAPGTLRHAVIQDEPLWIVFQSNMVIKLKHELIFNSYKTVDGRGANVHITGSGCITL
QSVSNVIIHNVHIYNCVPSGNTVVRSSPSHAGWRGRSDGDGISIFSSRNIWIDHCALSHC
TDGLIDAIMGSTAITISNSYFSHHDEVMLLGHNDNHLADSGMQVTIAFNHFGEKLVQRMP
RCRRGYIHVVNNDFTEWQMYAIGGSASPTINSQGNRYMAPADPNAKEVTKRVDTDEDEWA
GWNWRTDGDLLVNGAFFVPSGAGLIMQYAKATSVEAKSAGLIDQLTMNAGVIGGERDNGY
SISYGGGGRATGATSNGGGGPDGGGYGYGDGDNYSMIFGSGAPPTQLSRPPITILLSLLI
ILILYTIINCDGSLSSLSL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctcaattctccattctcttggtttgcatcttcttcctctctctcttctcattc
acctcatcccaaaatctctctctcccccatcaacaccctgaccctgaagctgttgtccag
catgtgcaaaggagtgttaatgcctcattttcaagaaggcatcagctcctctccgcccca
atccccaccggcattgcccaatgcctcaccggaaaccccatcgacgactgctggcgctgc
gacccgaattggggctccaaccgccagcgcctggccgattgcgcaattggtttcggccgg
gccgctctggggggcaaaggaggccgttactacgtagtaacggactcctctgaccgggac
gcggccaaccctgccccgggcaccctccgccacgcggtcatccaagacgagcccctgtgg
atcgtcttccagtcgaacatggtgatcaagctgaagcacgagctcattttcaacagctac
aagaccgtggacggtcgtggcgcgaacgtccacatcacggggtccgggtgcatcaccctc
cagtccgtgagcaatgtgatcatccacaacgtgcacatttacaactgtgttccctccggg
aacacagttgtaaggtcgagcccctcgcacgcggggtggagggggaggtcggacggggac
gggatatccatcttctcgtcgaggaacatatggatcgaccactgcgcgttgtcgcattgc
acggatgggctaatcgatgccatcatgggatcgaccgccatcaccatctcgaatagctac
ttctcccaccacgacgaggttatgctgctcggccacaacgacaaccacttggctgactcg
gggatgcaggtgactatcgcgttcaatcactttggggagaagctcgtgcagaggatgccg
aggtgcaggagaggctacattcacgtcgtgaacaatgatttcaccgagtggcaaatgtac
gcgatcggagggagtgctagtcccaccatcaacagccaggggaaccggtatatggcaccg
gccgatcccaatgccaaggaggtaacaaagcgcgtggacacggacgaggacgagtgggcc
gggtggaactggaggacggatggggaccttctggtgaacggtgcgttcttcgtgccgtcc
ggtgcggggctcatcatgcagtatgctaaggcaacgagcgtcgaggcgaagtcagccggg
ctcatcgaccaactcaccatgaacgccggtgttattggtggcgaaagggacaatggctat
agcatatcatatgggggaggggggagggctaccggcgcaaccagtaacggcggtggcggg
cccgacggcggtggctacggctacggtgatggtgacaactatagtatgatatttgggagc
ggcgcgccaccaactcaattatcccggccacccatcactatcttattgtctcttttaatt
attttaattttgtatactatcatcaattgtgatggttcactatcatcactctcattatag
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