Salvia splendens (scarlet sage): 121766606
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Entry
121766606 CDS
T07627
Name
(RefSeq) probable pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121766606
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121766606
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
121766606
NCBI-ProteinID:
XP_042018824
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Position
15:1682447..1684061
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AA seq
384 aa
AA seq
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MLSRAMQGITLCLIRAISIAILLSLGRVEARRTVDNMNVIDKCWRTNPDWRRNRQQLATC
TVGFAGQMFNNIGDDVINYKVTDPSDDPLSPRPGTLRHAMTSITGKIWITFKRHMNITLA
KPLLVSSLTTIDARGANVHIANGGCLLIKKANNVIIHGLYIHDCKPQEPGPVKGPGGEIM
HLGPTDGDAIRVVSSSRIWIDHNTMYDSVDGLIDVTRGSTDITISNNWFRYQDKVMLLGH
DDGFRRDQNMRVTVAFNHFGPNCVQRMPRIRFGYAHVVNNLYLGWGIYAIGGSMNPSIKS
QANLFIAPKGGNKEITWDSGLTGNFKSIEDVFENGASFTTTVDAGATMRPNYAPDQMFEV
EDGMRVRDLTKSAGVLKCPKIARC
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgctctcaagggccatgcaaggtataaccttgtgtttgatccgggctatctcaatagcc
atcctattgagtttaggccgggtcgaggcccgaagaactgtcgataacatgaacgtcatc
gacaagtgctggagaacgaacccggactggcggagaaaccggcaacaactagctacgtgc
accgttggattcgcgggtcaaatgttcaacaacatcggagatgacgtgatcaactacaaa
gtaacggaccctagcgacgaccccttgagcccgaggcccggtacgttgaggcatgccatg
acgagcatcacaggcaagatttggatcacattcaagaggcacatgaacatcacccttgcc
aaacccctccttgttagtagcttgacaacgattgatgcaagaggtgccaatgtccacatt
gcaaatggtggatgcctacttatcaaaaaggccaataatgtgattatccatggcctctac
atccatgactgcaagccgcaagagcccggcccggtgaagggcccgggaggggagatcatg
catttgggcccaacagacggggacgcgatcagggttgtgtcatcttcgaggatatggatc
gatcacaacacaatgtacgacagtgtggatgggttgattgatgtcacaagaggatcaaca
gacatcacaatatcgaacaactggtttaggtatcaagataaagtgatgcttctcgggcac
gatgatggctttcgaagggatcaaaacatgagggtcacagttgccttcaaccatttcggc
ccgaactgcgtacaaagaatgccaaggattcgatttggatatgcacatgttgtcaacaac
ctttacctaggatgggggatatatgcaattggagggagcatgaaccctagcatcaagagc
caagcaaacctcttcattgctccaaagggaggcaacaaggagataacatgggatagtggt
ctcaccggcaacttcaaatctatcgaggatgtgttcgagaatggagcctcgttcacgaca
acggttgatgcgggtgccacaatgaggccaaactatgcaccagatcaaatgtttgaagtt
gaagatgggatgcgagtgagggacttgacaaaatctgctggtgttttgaagtgtcctaaa
atagctagatgctaa
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