Salvia splendens (scarlet sage): 121782220
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Entry
121782220 CDS
T07627
Name
(RefSeq) probable pectate lyase 13 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121782220
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121782220
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
121782220
NCBI-ProteinID:
XP_042035894
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Position
20:complement(23851711..23855131)
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AA seq
494 aa
AA seq
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MLLPLTYIPLLLLLLCLICSSYVEAATSFNLTLSHQHPHPDFVALQVRRSVNESLSKRRQ
ILETPLNSKAQSQCLTGNPIDDCWRCDSNWGNNRQRLADCAIGFGQGAMGGKGGRFYEVT
DSSDHDTVSPAPGTLRYAVIQDEPLWITFKYNMVIKLKHELIVNNYKTIDGRGANVQITG
NGCITLQYVSNVIIHNVHIYNCKPSGNTDIRSSPTHVGHRGKSDGDAISIFGSRNIWIDH
CTLSHCTDGLVDIIMGSTAITVSNNYFSDHNEVMLLGHDDKYLPDSGMQVTIALNRFGEG
LVQRMPRIRRGYVHVVNNDYFQWKMYAIGGSASPTVNSEENRFTAPADPSAKEVTRHEDT
SEGGWADWNWRTDGDLMVNGAFFVSSGEGATMQYAKASSFNPKSASQIEQLTMNAGVLGG
TRDNSVSSYGGGSTTVTGGESGGGGSSGGGGDYFGMIFAGSAAVRGSSPPTILFLSSLII
LMLYISSSIVNGLV
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttcctctcacctacattcccttgctgctgttgctgctatgtctcatttgctct
tcctatgttgaagctgccacttccttcaatctcaccctctctcatcagcacccccaccct
gattttgtagctctacaagtcagaaggagtgtgaatgaatccctatcgaaacgccgccag
attcttgaaacacccttgaatagtaaggcacagtcacaatgcctgaccgggaaccccata
gacgactgctggcgatgcgactctaactggggaaacaaccggcagcgcctggctgactgt
gctattgggttcggccagggtgcgatgggaggcaaagggggtcgtttctatgaggtgacg
gactcctctgatcacgacacagtcagtccggcccctggcacccttcgttatgctgtcatc
caagacgagcccctttggatcaccttcaagtataacatggtcatcaagctcaagcacgag
ctgattgtcaacaactacaagaccatagatgggcgtggtgccaatgtgcagatcacgggg
aatggatgcatcacgttgcagtatgtgagcaatgtcatcatccacaacgtgcacatttac
aactgtaaaccttctgggaacactgatattaggtcgagccccacgcatgttggccacagg
gggaagtcggatggtgatgccatatccatctttggttcgaggaacatatggatcgatcat
tgcacgctgtcacattgcaccgatggattggtggatatcatcatgggatctacggctatt
actgtgtcaaataactatttctctgatcataatgaggttatgctgctcgggcatgatgac
aagtacttgcccgactcgggaatgcaggtcacaatagccttgaacaggttcggtgagggg
ctcgtgcagaggatgccaagaataaggaggggctacgtccatgtggtgaacaacgactat
tttcagtggaaaatgtacgcgataggagggagtgctagcccgactgtcaatagtgaggaa
aaccgcttcactgcaccagctgatccaagtgcgaaagaggtgacaagacatgaggatacg
agtgaagggggttgggccgactggaattggaggacggatggggacttgatggtgaacggt
gctttctttgtgtcatctggtgaaggggctacgatgcagtatgccaaggcctcgagcttc
aaccctaaatcggctagccaaatcgaacaactaaccatgaatgctggtgttcttggtggc
acaagggacaatagcgtcagctcatatggtggcgggtccaccaccgtgacaggcggcgaa
agcggcggcggagggtccagcggtggtggaggtgactattttgggatgatatttgcgggc
agcgccgccgtaagagggtcatcgccgcccaccattttgtttttatcttccctaattatt
ttaatgttgtatatttcctcctccattgttaatggtttggtatga
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