Salvia splendens (scarlet sage): 121786267
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Entry
121786267 CDS
T07627
Name
(RefSeq) probable pectate lyase 22
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121786267
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121786267
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
VWC2L_C
Motif
Other DBs
NCBI-GeneID:
121786267
NCBI-ProteinID:
XP_042040801
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Position
22:complement(16270976..16272605)
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AA seq
403 aa
AA seq
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MAIVLLLMWLTLLSHASTLSARPVMHDASQPTRWRSMKNMTEGNGAGSATCRTGNPIDDC
WRCDPDWEANRKVLADCGIGFGRDAIGGRDGEFYIVTTEEDDPREPRQGMLRHAVIQSEP
LWIIFERDMSITLKEELMMNSYKTIDGRGFNVEMANGPCITIQGVTNIIIHGIYIHDCVQ
GGNTVVTDGPQHYELRGVSDGDGISIFGGRDVWIDHCTLSHCHDGLIDVVSGSTAITVSN
NYMFRHNEVMLMGHSDDYVADKKMQVTIAFNYFGEGLVQRMPRCRHGYFHVVNNVYTGWE
MYAIGGSANPTINSQGNVFIAADDDHTKEVTKRESSPGDEEWKSWNWRSEGDLLLNGARF
VASGNATAATYAKASSMVARPASLLTSIIPAAGVVNCRIGQPC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcaatagtcttgttactcatgtggcttaccctgctttcgcatgcttccacactctcc
gcacggccggtgatgcatgacgcgtcccaacctacccgatggaggtcaatgaagaacatg
acagaaggaaacggggcagggtcggccacgtgcaggacaggcaacccgatcgacgactgc
tggcggtgcgacccagactgggaggcgaatcgaaaagtgctggcggactgcgggatcggg
ttcgggcgcgacgcgatcggggggcgcgacggggagttttatatcgtgacgaccgaggag
gacgacccccgggagccgaggcaggggatgctgaggcacgcggtgatccagagcgagccc
ctgtggataatcttcgagcgcgacatgagcatcaccctgaaggaggagctcatgatgaac
tcgtacaagaccatagacgggagagggttcaacgtcgagatggccaacggtccgtgcata
acaatacaaggtgtgaccaacattatcattcacggtatttacatacacgactgtgtccag
ggcgggaacaccgtggtgacggacggcccgcagcactacgagctgcggggcgtctctgat
ggggacgggatctcgatatttggaggccgcgacgtgtggatcgaccactgcaccctctcg
cactgccacgacggcctaatcgacgtagtctccgggtccacggccatcacggtctccaac
aactacatgtttcgccacaatgaagtgatgcttatgggacatagtgatgattatgtagca
gataagaagatgcaagtcaccattgcttttaactactttggggaaggtctggtgcagaga
atgccgaggtgtaggcatggctactttcatgttgttaacaatgtgtacactgggtgggag
atgtacgcgattgggggaagtgctaacccgacgatcaatagccagggcaacgtgtttatc
gcagcagacgatgatcatacgaaagaggtgacgaaaagggaaagcagcccgggagatgag
gagtggaagagctggaattggagatcggagggagatcttttgttgaacggagcgcgattt
gtagcttcaggaaatgcaacggcggcgacctacgccaaagcatcgagcatggttgcaaga
ccagcttcgcttttaactagtataataccggctgcaggagttgtcaattgcagaattggc
caaccctgctag
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