Salvia splendens (scarlet sage): 121787985
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Entry
121787985 CDS
T07627
Name
(RefSeq) uncharacterized protein LOC121787985
KO
K14315
nucleoporin NDC1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121787985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121787985
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121787985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
DUF3079
Motif
Other DBs
NCBI-GeneID:
121787985
NCBI-ProteinID:
XP_042042776
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Position
22:complement(182701..185946)
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AA seq
560 aa
AA seq
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MSISAAIHRTLFKEKDGGGGGGGALSAIIRHRFLSFLIWQSLQSTLILFLSKTLLLSPFT
KYPFSPIFLSLLYFLCFHLSLFVFSVSLFFVSSPHPLQFASPLEISLSFIRLIFVSGGEQ
SLLRTRVRVSLSFVLFVCLCAVAGAVSAISVCWGCDAYYDADSGSIRVGVLGFRGFVIGL
IYGLHYVYKQRWVFRFPIIQRPPFFSYKMGLPLSIRRALRFSAVGFALSGILSFFLPDEY
KSQGSVGKFVVEQVVFYLGSFVVVLCWELSHHLHQVLHTKRFVFAPPKGSAAAETNPSEP
LLATIEESTPNSLLQYLAYLDICMVCENSVDSWRRAAFFEETGETYRRVIAACLRPLEQF
TQKLAEGLECSSADKSMQLSDQLTSPTERLAVLKLNVSFFDAQLCAWCARVVASLTSRSR
KEDKFGVAQLSGSNAAVISTLLSSLLAVEALMGKKTNVQSAHLMGPAGIKWATVNTGRRE
STAGAMGKIRGSPLYAKAYSMADILKTSIYCIASAFQNEMLSIGKAGLLEKEWIISSKPL
YGTQELLLHKLRLFLDHQAN
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatctccgccgccatccaccgcactctcttcaaagagaaggacggcggcggcggt
ggtggaggagctctctccgccatcatcaggcaccgcttcctcagcttcttaatttggcaa
tcgctccaatcaaccctcatactcttcctctccaaaacccttcttctttccccctttact
aaatacccattttcccccatttttctatccctactctacttcctttgcttccacttgtct
ctcttcgtattctccgtctccctcttcttcgtttcttctccgcatcctctgcagttcgcc
tcccctctcgaaatctcgctttcgtttattcgcctaatatttgtttccggaggcgagcag
agcttgctgaggaccagggtcagagtgtcgttgagcttcgttctgtttgtgtgcctctgt
gccgtggccggcgcggtttcggcaatttctgtgtgctggggttgtgatgcttattatgat
gctgattcgggttcgattagggttggtgttttggggtttaggggtttcgtgatcggattg
atttatggcttgcattatgtgtataagcaacggtgggttttcaggtttccgataattcag
cgccctccgttcttcagctacaaaatggggcttcccttgtctattagacgggctttaagg
ttttctgctgttggctttgcactatctgggatactatcttttttcttgcctgatgagtac
aagagtcaaggttcagttggaaagttcgttgtcgagcaggttgtgttttatcttgggagt
tttgtagtagttctttgctgggaactaagccaccatctgcatcaggttctacataccaag
agatttgtatttgcgcccccaaaaggatcagcagcagcagaaacaaatccaagtgagccg
ctcctggccacaattgaagaaagcacccccaattcacttttgcagtatcttgcttatctt
gatatctgcatggtgtgtgagaatagtgttgattcatggcgccgagctgccttctttgag
gagactggtgagacttatagaagagttatagctgcttgcctacggcctctggaacagttc
acccagaaactagctgaaggtctagagtgctcttcagctgataagtcgatgcaactatct
gaccagttaacttcaccaacggagcggcttgctgttctgaaactcaatgtctcatttttt
gatgcacagctgtgtgcatggtgtgctcgggttgttgcttcattaacttcaaggtcgcgc
aaggaggacaaatttggtgttgctcaactctcagggagtaatgctgctgtaatctcgaca
ttgctatctagtttgttagctgtggaagctctcatgggaaagaaaaccaacgttcagtcc
gcgcatttgatgggtcctgctggaatcaaatgggccactgtcaacactggcagaagggag
tcaacagcaggtgccatggggaaaataagagggagccctctgtatgcaaaagcttattca
atggctgatatcctgaaaacttcaatttactgcattgcatctgcttttcagaatgagatg
ctgagcattgggaaagcagggctccttgagaaggaatggatcattagcagtaaaccgctt
tatggaactcaagagctcctcctacacaaattgagacttttcttggaccaccaggcaaac
tag
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