Salvia splendens (scarlet sage): 121789928
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Entry
121789928 CDS
T07627
Name
(RefSeq) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121789928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121789928
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121789928
Enzymes [BR:
sspl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
121789928
Transcription machinery [BR:
sspl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
121789928
DNA repair and recombination proteins [BR:
sspl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
121789928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
121789928
NCBI-ProteinID:
XP_042044200
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MWIKAKGPTHQVKAYPRLGPSLRIEWLPGDPRPVDVAVSSANVTAFGRLDGRRDTSRGEI
ANTNTPSPACTPLSKLDKERLLVWVHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNM
QRQAVPLSRSEKCIIGTGLERQAALDSGALAIAERGGKIIYIDIDKILFSGNGDTLSISL
VMYERSNKNTCMHQKPQVRRGKCIKKGQILADGAATVGGELALGKNVLVAYMPWEGYNSE
DAVLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITNEIPHLEAHLLRNLNKNGIVML
GSWVETGDILVGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVIDV
RWIQKRGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGKPV
DMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEAS
KQTANPWVFEPEYPGKSRILDGRTGSPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYAL
VTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTITGGT
IPNPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtggatcaaagcaaaggggcctacgcaccaagtaaaagcttacccgcggctcggccct
tcgctgaggattgagtggctacccggcgatccaaggccagttgatgttgcagtgtccagt
gccaatgtgactgctttcgggcggcttgatggaaggcgagacacttccagaggtgaaata
gccaacaccaatacgcctagtcctgcctgtacgcctttgtcaaagctcgataaggaaaga
cttctggtgtgggttcatcttcgaagtatttttcccttccaatatttttctattggagct
tccctcattccttttattgaacataatgatgcgaatagggctttaatgagttctaatatg
caacgccaggcagttccgctttctcggtccgagaaatgcattatcggaactgggttggaa
cgacaagcagctctagattcgggggctcttgctatagctgaacgcgggggaaagatcatt
tatatagatattgacaaaatccttttctcggggaatggagatactctaagcatttcatta
gttatgtatgaacgttccaacaaaaatacttgtatgcatcaaaaaccccaggttcggcgg
ggtaaatgcattaaaaagggacaaattttagcagatggtgctgctacggttggtggcgaa
cttgctttggggaaaaacgtattagtagcttatatgccatgggagggttacaattctgaa
gatgcggtactcattagcgagcgtttggtatatgaagatatttatacttcttttcacata
cggaaatatgagattcagactcatgtgacaagccaaggccctgaaaggatcactaacgaa
ataccgcatttagaagcccatttacttcgcaatttaaacaaaaatggaattgtgatgttg
ggatcttgggtagagacgggtgatattttagtaggtaaattaacgccccaaatggtgaaa
gaatcctcgtatgcccccgaagatagattgttacgggctatactcggcattcaggtatct
acttcaaaagaaacttgtttaaaactccctataggtggtaggggccgggttattgatgtg
aggtggatccagaaaagaggaggttctagttataatccagaaatgattcgtgtatatatt
tcacagaaacgtgaaatcaaagtaggcgataaagtagccggaaggcatggaaataaaggt
atcatttcaaaaattttgccgagacaagatatgccttatctgcaagatggaaaacccgtt
gatatggtcttcaacccattaggagtaccttcacgaatgaatgtaggacagatatttgaa
tgttcgctcgggttagcagggggtttgctagacagacattatcgaatagcgccttttgat
gagagatatgaacaagaagcttccagaaaactagtgttttctgaattatatgaagccagt
aagcaaacagcgaatccatgggtatttgaacccgaatatccaggaaaaagcagaatattg
gatggaaggacggggagcccttttgaacaacccgttataataggaaagccttatatcttg
aaattaattcatcaagttgatgataaaatccatggacgttccagtggacattatgcgctt
gttacacaacaaccccttaggggaagggcaaaacaagggggacaacgggtaggagaaatg
gaggtttgggctctagaaggatttggtgttgctcatattttacaagagatgcttacttat
aaatctgatcatattagagcgcgtcaagaagtacttggtactacgatcactggaggaaca
atacctaatcctgaggatgctcccgaatcatttcgactgcttgttcgagaactacgatct
ttagctctggaactgaatcatttccttgtatctgagaaaaacttccagattaataggaag
gaagcttaa
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