Salvia splendens (scarlet sage): 121798873
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Entry
121798873 CDS
T07627
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121798873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121798873
03012 Translation factors [BR:
sspl03012
]
121798873
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
121798873
Translation factors [BR:
sspl03012
]
Eukaryotic type
Release factors
121798873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
RNPP_C
Motif
Other DBs
NCBI-GeneID:
121798873
NCBI-ProteinID:
XP_042054042
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All DBs
Position
4:16522076..16525424
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AA seq
436 aa
AA seq
DB search
MADGQENDKNIEIWKIKKLIKALEAAKGNGTSMISLIIPPGDQIARVTKMLAEEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIITDDGKEKKVTFDFAPFKAIN
ASLYLCDNKFHTEPLSQLLESDEKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKFFEEISQDTG
KYVFSVDDTIKALEMGAVETLIVWENMDINRFTLKNTVTNEIVIKYLNKEQEHDPSNFKD
AASSGELEVQEKMPLLEWFANEYRNFGCSLEFVTNRSQEGSQFCRGFGGIGGILRYQLDI
RSFDEPSDEGEFYDSD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcagacggccaggaaaatgataagaatattgaaatatggaaaataaagaaattgatt
aaggctctggaagctgctaagggaaatggtaccagcatgatatcccttataattccccca
ggtgatcagatagcccgggtcaccaaaatgcttgcagaagagtatggaacagcttcaaat
attaaaagcagggtgaatcgtcaatcggtgctaggtgcaatcacctctgcgcagcagagg
cttaagttgtacaataaagtcccaccgaatggactcgtgctctatactggaactataata
acagatgatggaaaagagaaaaaggtcaccttcgactttgcaccttttaaggccataaat
gcttctctttacctttgtgacaataagtttcatactgagccattgtctcaactcctggaa
tctgatgaaaagtttgggtttattgtcatggatggtaatgggaccctttttggaacctta
agtggtaatacaagagaagtgcttcacaagttctcagttgatcttccaaagaaacatgga
agaggaggacaatcagctcttcggtttgctcgtcttcgaatggagaagcgtcacaactat
gtgaggaagactgcagagcttgctactcaattctacattaatcctgctaccagtcagccg
aatgtatcagggttgatacttgctgggtcagctgatttcaagactgagctgagtcagtct
gatatgtttgatcctcgcctccaagccaagatactgaatgtggtagatgtatcctatggt
ggggaaaatggtttcaatcaagccattgaattatctgctgagattttgtccaatgttaag
ttcatacaagaaaaacgcttgatagggaaattttttgaagaaatcagtcaagataccgga
aaatatgtattttccgtggatgatacgataaaagctttggagatgggagctgttgaaaca
ttgatagtgtgggaaaacatggatataaatcgttttacactaaaaaatactgtgaccaat
gagattgtcatcaaatacttgaacaaggagcaagagcatgacccgagcaacttcaaggat
gctgcatcatccggagaattggaggttcaagagaaaatgccattactggagtggtttgct
aatgaatatagaaactttggctgttcacttgagtttgtgacaaatcgatcccaggaagga
tcacagttctgccgagggtttggtggcattggtggaattcttcgttaccagcttgacatt
cgatcctttgatgagccatccgacgaaggagagttttatgactcagactaa
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