Salvia splendens (scarlet sage): 121802430
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Entry
121802430 CDS
T07627
Name
(RefSeq) probable pectate lyase 16
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121802430
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121802430
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
121802430
NCBI-ProteinID:
XP_042058037
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Position
5:complement(8150859..8152525)
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AA seq
348 aa
AA seq
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MNKIDSCWRADPNWALTRKALADCAIGFGSGAVGGKNGAIYIVTDASDDAINPKPGTLRY
GVIQAQPLWIIFESDMSIELDNELIVNSYKTIDGRGARVEISNGPCITIEGVSHVIVHGL
SIHDCKPGKPGLVRSSTDHVGHRLGSDGDGITILDSSNVWIDHCYLARCTDGLLDVTHAS
NFVTLSNNYFTQHDKVMLLGHKDGFTDDKIMKVTVVFNHFGPGLVQRMPRVRYGYAHVAN
NKYDQWIMYAIGGSADPTILSEANYFVASEKNIQRQVTKRETKDDWKSWKWRSTKDVFVN
GAYFIPSGYGSVAPNYLASQHFEAAVGSMVPALTSDAGPLFCAPHQQC
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaatagactcgtgctggcgggccgacccgaattgggctctgacccggaaggcg
ctagccgattgtgcaataggattcggaagtggggccgtgggagggaagaatggggctata
tacatcgtgactgacgcgtcagatgacgcgattaaccctaagccgggcacgcttcgttat
ggtgtgatccaagcccaaccgctgtggatcatatttgaaagcgacatgagtattgaactc
gataacgagttgattgtgaatagttataagacgatcgatgggagaggggcgcgagtagag
atatcaaatgggccgtgcattactattgagggcgtgagccacgtcatagtccacgggctt
agcatccacgactgcaagcccgggaagcctggcctggtgcggagtagcacggaccatgtc
gggcataggctcggtagcgatggagatggaattaccattcttgattcgtccaatgtgtgg
atcgatcattgctaccttgctcgttgcacggatggtcttcttgacgtgacacatgcatca
aattttgttactctttccaacaattacttcactcaacatgataaggtgatgctgttggga
cataaagatggatttacagatgacaaaatcatgaaagtgacggtggtttttaatcacttt
gggcctggattggtgcaaagaatgccaagagttcgatacggatacgcccacgtagcaaac
aacaagtacgatcagtggattatgtacgcaattggtgggagtgctgatccaactatactt
agcgaagccaattattttgtggcttctgaaaaaaatatccaacggcaggtaacaaaacgc
gagacgaaggatgattggaagagctggaagtggaggtcgacaaaggacgtgttcgtaaat
ggggcatattttatcccatcaggatatggaagtgttgctccaaattatttggcatcgcaa
cactttgaagccgctgtcggatcaatggttcctgctttaacatccgatgctggtcccctc
ttttgtgcacctcaccaacaatgttga
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