Salvia splendens (scarlet sage): 121805384
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Entry
121805384 CDS
T07627
Name
(RefSeq) elongator complex protein 1-like isoform X1
KO
K11373
elongator complex protein 1
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sspl03016
]
121805384
Transfer RNA biogenesis [BR:
sspl03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
121805384
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
TPR_IFT80_172
Motif
Other DBs
NCBI-GeneID:
121805384
NCBI-ProteinID:
XP_042061143
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All DBs
Position
5:complement(31469919..31475890)
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AA seq
1322 aa
AA seq
DB search
MKNLKLSWEVWSEVQLRKEQEDESLRLATFDIERSRLFFASTANFIYTTQLPSPQTEGAW
NNGSAPATRLDLETGDVITCLDYLMEKEALVAGTLRGYLLLYSVDDDSTDIVGQVEGGVA
CISPSPDGDLLAIMTGFGQILVMNLDWDLLYEMPLDDSPEGVDVPDGSAFSVDCFSEASI
SWRGDGKFFASLSKVHDSLSFHKKLKVWERDSGELHSVSDSKPFMGSVIDWNQIGAKIVT
VYDKNEEKKCPSIVLYEKNGLERSSFSINEGIDVTVEFLKFNCNSDLLAAVVRGETVDTL
KIWHFSNNRWYTKQEIRYSKEDAIKFMWDLTNPLKLICWTLDGRIITCKFVWVTAVMGNS
IAFVIDGSKVLVTPLSLSLMPPPMYFLEFEFPCAVRDITSYSRSSHNRLAASLSDGRLCI
VELPLLDEWDELEGQTFRVMASHSGINFGPLLHLAWLDSHTLLGVSTLDYSHSNFSNRNF
LDGDVHKRLYLHGIEISCSEDRVSSSVTCLGWQAEALNHMHLEGVVVGIVCNPLTSCSAF
VQFEGGKTFECTAKLGVNRGVSLQRCDEMDFLSSCPWMDIAPVEGHTREKPLLLGLDDNG
KLHLEGRILCNNCSSFSTYSSSGDGMITHVVIATKQDLLFIVDVDDIVRGELEKNYENFQ
PVVAKNRKGENESIFINIWEKGAEIVGVLHGDGSAVILQTPRGNLECVYPRKLVLVSIIN
VLANRRFKDALQMVRRHRIDFNIIVDHCGWQAFTGLAADFIVQVGNLNYVTEFVCAIKGE
DVMETLYKNYTSLPCIKRDKVVRYGESKSADGDNKVSSVLLAVRNALEDQIEETPARELC
ILTTLARSTPPALEEALRRVKVIRELELSAANDTKRPYPSSEESLKHLLWLSESEAVFEA
ALGLYDLNLAAIVALNSQKDPKEFLPLLQELERMPQLLMQYNIDLKLQRYESALRHIVSA
GDSYYEDSLNLMSKVPELYPMGLQLITSPDKKQQVLEAWGDHLNATKCFEDAATTYLCCS
CLEKALKAYRAGGNWTGVLTVAGLMNLGKDDLLQLARELSEELQALGKPRDAAKILLEYC
CDVYNGVSLLVDARSWEESLRIAFLHRRDDLVLVVKDASLECASVLMGEYNEGVEKVGKY
LTRYLAVRQRRLLLAATIKSEERLEGYLDDETASQASSNFSGMSAYTTGSRRGSTAPTSI
STSTKGRGRQRNRGKIRAGSPDEETALVEHLRGMSLAEGAKHELKSLLICLVMLGEEDTA
RKLQHTAEKFQVSQTAAVKLADDLMPIDSIDEQAFNLEIYIQNVQKEVQNSDAFSWKSKV
LG
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacctcaagctttcttgggaggtttggtcggaggtgcaattgcgaaaggagcag
gaagatgaatccctgcggttggccaccttcgacatcgagcgcagccgcctcttcttcgcc
tccaccgccaacttcatctacactactcaacttccttcacctcagactgagggcgcatgg
aataatggctcagcgcctgccactcggttggatttggaaactggagacgtgatcacatgt
ttggattatctcatggaaaaggaagctttggtagctggaacattaagagggtatctcttg
ctgtattcggtcgatgatgattcaaccgatattgtaggccaggtagaaggtggagttgcg
tgtatttctcccagtccagatggagatttacttgctataatgactggttttgggcagatc
ctagtcatgaatttggattgggatctattgtatgagatgcctcttgatgattcgcccgaa
ggtgttgacgtaccagatggatcagctttttcagttgattgtttctctgaggcctcaatt
tcttggagaggtgacgggaagttttttgcttcactgagcaaggtccatgattccttgtcc
ttccacaagaagcttaaagtatgggagcgtgattctggggaactccactctgtctcagac
tcaaagccattcatggggtctgttattgactggaaccagattggggctaaaattgtcacc
gtgtatgataagaatgaagagaagaaatgtccgtctatagttctatatgagaaaaatggt
ctagagaggagctcattcagtattaatgagggaatagatgtaactgtagaatttctaaag
ttcaattgtaattcagatcttctcgctgctgttgtcagaggtgaaacagttgataccctg
aagatatggcactttagcaataaccgctggtatacgaagcaagagatcagatattccaag
gaagatgcaataaagtttatgtgggacttgaccaacccactaaagttgatctgttggact
cttgatggcagaatcataacctgcaagtttgtctgggttacagctgtgatgggaaactca
atagcatttgtcattgatggttcaaaagttctggttaccccattgtctttgtccttgatg
ccacctcctatgtactttcttgaattcgaatttccctgtgccgttagggacattacttct
tattcaagatcttcccataatcgtctggctgcatctctatcagacggacgcttgtgcatt
gtggagcttcctttgcttgatgaatgggatgagctggaaggccagacattcagagttatg
gcttcacactctggtataaactttgggcctttgctgcatcttgcttggttggattcccac
acacttcttggtgtttctactttagattacagtcacagtaattttagtaacagaaacttc
ctagatggggatgttcataaaaggctttacttgcatggaattgagataagttgctctgaa
gatcgcgtttctagttccgtgacatgcttaggatggcaagcagaagctctgaatcatatg
catcttgaaggggttgttgttggcatagtttgtaatccacttactagctgctctgcattt
gttcagtttgaaggtggaaaaacatttgagtgtacagcaaaattaggtgtgaacagaggg
gtcagtcttcagagatgtgatgaaatggatttcctatcgtcctgcccatggatggatatt
gccccagttgaagggcatacccgagagaaaccattgcttttaggtctcgatgacaatgga
aaactgcatcttgaaggaagaatattgtgtaacaattgcagtagcttttcaacttactca
agttcaggtgatgggatgataacacatgtggtaatcgccactaaacaagatttactattt
attgttgatgttgatgatattgtgcgtggggaactggaaaagaattatgagaatttccaa
cctgttgtagcaaagaatagaaaaggagaaaatgaaagcatttttattaacatatgggaa
aaaggagcagaaattgtaggtgttcttcatggtgatgggtctgctgtgatattacaaact
cctcgaggaaatcttgaatgtgtgtatcccaggaaattagttcttgtttcgatcatcaac
gtgttggctaataggcggtttaaagatgccttgcaaatggtaagaaggcacaggattgat
tttaacatcattgttgatcattgtggttggcaagcctttactgggttagctgcagacttt
attgtacaggttggcaacctgaactatgtaactgagtttgtttgtgccattaaaggtgaa
gatgttatggagacactttataaaaattatacatccttaccatgcatcaagagggataaa
gttgtaagatatggtgaatcgaagagtgcagatggtgataataaagtatcctctgtttta
ttggccgtgaggaatgctcttgaggatcaaattgaggaaactccagcaagagagctttgc
attctgaccaccttggctagaagtacccccccagctctggaggaggctttgaggagagta
aaagttatccgagaactagagctttctgctgctaatgatacaaaacgaccttatccttca
tcagaggaatccttgaagcatttgctatggctttctgagtcagaggcagtttttgaagct
gctttgggcctttatgatttaaatcttgctgctattgttgcgttaaattcacaaaaggac
ccaaaagaatttttgccacttctacaagaattggaacgtatgcctcaacttttgatgcaa
tacaacattgaccttaaattacaaaggtatgaaagtgctttaaggcacattgtttctgct
ggggactcttattatgaagattccttgaatctaatgagtaaagtcccagagctttatccg
atgggacttcagttgattacttctcctgacaagaaacaacaggtgcttgaagcatggggt
gatcatcttaatgccacaaaatgttttgaggatgctgctaccacatatttgtgttgctct
tgtttagagaaggcactgaaggcatatcgtgctggtggtaattggactggggttctgact
gtggctggccttatgaaccttggaaaggatgatcttctgcaactggcacgtgagctgagt
gaggaacttcaagcacttggtaaacccagggatgcggcaaaaatacttttggagtactgt
tgtgatgtttataatggtgttagcctcttggtggatgcaaggagttgggaagagtcttta
aggattgctttcttgcacagaagagatgatctagttttagtagtgaaggatgcttctctg
gaatgtgcaagtgtgctgatgggagaatataatgaaggggtggagaaagttggaaagtac
ttgacccgttacctagcagttcgccagagaagattattacttgctgcaacaattaaatcc
gaggagagattagagggctatcttgatgatgaaactgcttcacaagctagcagtaatttt
agtggaatgagtgcatacaccaccgggtcgagaagaggttcaactgctcccacctctatc
agcacgtccactaagggaagaggtcgccaacggaacagggggaagattagagctggaagc
cctgatgaggagacggctttagttgagcatttgagggggatgtctctggctgaaggagca
aaacacgagctcaagtctttgttaatttgcctcgtgatgctcggcgaggaagacactgca
aggaaactgcaacacactgctgagaagtttcaagtgtctcaaactgcagcagtgaagttg
gcagatgatttgatgccaattgacagcattgatgagcaggccttcaatctggagatttac
attcagaatgtacagaaagaagtgcagaattcagatgcattctcctggaaatcgaaggta
ctggggtga
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