Salvia splendens (scarlet sage): 121807176
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Entry
121807176 CDS
T07627
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121807176
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121807176
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
121807176
NCBI-ProteinID:
XP_042063316
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Position
6:complement(11756547..11758454)
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AA seq
447 aa
AA seq
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MREIKIYPWLLMVLFGCCWILEIVNGNIGEWDEVWKKRSEESWNRTLETYEPVPEHIVSH
LNVHANKAVKEVEEINAKENSTRRELLKGYTGPCMATNPIDRCWRCRPRWAKKRFRLADC
VLGFGYKTTGGKNGDIYVVTDYTDHDMVNPRPGTLRHAVIQKEPLWIIFERDMLITLQQE
LIMQGDKTIDGRGVRVDIAYGAGITIQFVSNVIIHGIRVHDILSKSGGMVRDSVDHYGFR
TVSDGDGISIFGSQNIWIDHVSMKNCTDGLIDAIEGSTGISITNSHFTDHDEALLFSAND
MATYDDKMQVTVAFNHFGKRMVQRMPRCRFGYFHVVNNDYTHWKMYAIGGSSHPTIISQG
NRFVADHPFAKQVTKREKSPESEWMTWTWVSEGDLFLRGAYFVESGDRDWTKKHPELYDK
ILAAPAIHTAEMTKFTGVLNCIVGEPC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaataaagatatatccatggttgttaatggtgttatttggttgttgttggatt
ttagaaatcgttaatggtaatattggagaatgggatgaggtatggaagaagcgatccgag
gagtcatggaatcgaacacttgagacgtatgagcccgtccctgaacacatagttagtcat
ttgaatgttcatgccaacaaggcagtaaaagaggtggaagaaataaatgcaaaggaaaat
agcactcgaagggagctactaaagggctacacgggtccgtgcatggcgacaaacccaatc
gaccgttgctggagatgtcggccgaggtgggcgaagaagcggttcaggttggcggactgc
gtgctagggtttggatacaagacgacaggcggcaagaacggcgacatctatgtggtgacg
gactacaccgaccacgacatggtaaaccctaggccgggaaccctccggcacgcggtgatc
cagaaggagccgctgtggatcattttcgagcgcgacatgctcatcaccctccagcaggag
ctgatcatgcagggcgacaagactattgacgggcgtggcgtccgagtcgacattgcctat
ggcgccggcatcaccatccagttcgtcagcaacgtcatcatccacggcataagagtccac
gacatcttaagcaagagcggcggcatggttagagactctgtcgaccattacggcttccgc
actgtcagcgatggcgacggcatctccatctttgggtcacagaatatctggatcgatcat
gtctcgatgaagaattgcaccgatggccttatcgacgccatcgagggatccacgggcatc
agcatcaccaacagccacttcactgatcacgatgaggcattgctctttagtgcaaatgat
atggctacttatgatgataaaatgcaagttacggtagctttcaaccattttgggaaaaga
atggtgcagagaatgccgaggtgcagatttggttattttcatgttgttaacaatgactat
actcattggaaaatgtatgccattggtggaagcagtcatcccaccatcattagccagggc
aacagatttgttgccgatcacccttttgccaagcaggtgacaaaaagggagaaatctcca
gaatcagagtggatgacatggacatgggtatcagaaggagacctatttctgagaggggcg
tattttgtcgaatcaggagatagagattggactaagaagcatcctgaactttatgacaaa
attctggccgctccagctatacacacagcagaaatgactaaatttacaggtgtacttaat
tgtattgtaggagaaccctgttaa
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