Salvia splendens (scarlet sage): 121808108
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Entry
121808108 CDS
T07627
Name
(RefSeq) protein transport protein Sec24-like At4g32640 isoform X1
KO
K14007
protein transport protein SEC24
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121808108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121808108
Membrane trafficking [BR:
sspl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121808108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
121808108
NCBI-ProteinID:
XP_042064402
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Position
6:complement(10231745..10245050)
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AA seq
1078 aa
AA seq
DB search
MAAPGGPRPGNFPPNYNPNSLSNNMQNLQINQHNQQQPNNAGASAPRPPPNATPFGQRAP
AFSGSRPGPPPPGVFPRGPVPPNASAQTTLPPNMVSSRPAGPPPGSQPPHFASRPPPPGA
MPSSIGGPVAPSPSALGPRPGSYPSSPLTSAPSTPSHASGSGPVSNGPPTFAPGMTQSGP
PFPPAIGSMPRPLAGPPQTPAMLSSRPSSQPMQMHSSFGGPPTAVSSASGQLAPPFSGPP
QNMVPPLGSSPFSAPNTGMHQSINSPYGMQTWPAQPQQVAPPPPGSMQQPPRMFGMPPGL
SLPNQSMAMSHSGQAKIDPNQIPRLAPSASAIVHETRQGNQANPPPPATSDYIVKDTGNC
SPRYMRCTINQVPLTVDLLSTSGMQLSLLVQPLALAHPSEEPIHVVDFGESGPVRCSRCK
GYINPFVKFIDQGRRFICNLCGFTDETPRDYHCNLGPDGRRRDADERPELCRGTVEFVAT
KEYMVRDPMPAIFFFLIDVSMNATQTGATAAACSAIRQVIADLPKGPRTMVGIATFDSTI
QFYNLKRSSQQPLMLIVPDVQDVYTPLESDVIVQFSECCEHLEMLLDNIPTMFESNRIAD
SALGAAVKAAFLAMKSTGGKLLVFQSVLPSCGIGSLSAREAEGRSNMSAGEKEAHKLLQP
SDKTLKTMAMEFAEYQVCVDLFITSQMYVDIASLSVIPKTTGGQVYYYYPFSARSDPAKL
YNDLRWNITRPQGFEAVMRVRCSQGIQVQEYSGNFCKRIPTDVDLPAIDCDKTIMVSLNH
DDKLQEASECSFQCALLYTTVHGQRRIRVSTLSLPCTNMLSNLFRSADLDTQFACITKQA
AIGIPSAPLAQVRDQATNVCINILYSYRKFCATVSLSGQLILPEALKMLPLYTLALLKCV
GLRSDGRIDDRSVWINYVSPLPTTLVIPLVYPRMIALHDLNEKELDDSIIPVPIPLSSEH
IAIDGIYLLENGVDCLIYVGEDVQSNILQQMFGISSNEEIPNQFILQQYDNPLSKKLNDI
VNEIRRQRCSYLRLRLCKKGDPTGMMFFSYLVEDKMANGFSYVEYLIHIHRQIQNKMA
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcctgggggacctaggccagggaacttccccccgaattataacccgaattcc
ctttctaataatatgcaaaacctacaaattaatcagcataatcagcaacaaccgaacaat
gctggtgctagtgcccctagacctcctccgaatgccacaccattcggccaacgggctcca
gctttttctggtagcagaccaggcccgcctccccctggtgtatttccgaggggcccggta
ccgcccaatgcttctgctcaaactactctgcctccaaatatggtttcttctagacccgct
ggtccaccacctgggtctcagccgcctcactttgcatcaagaccaccaccacctggggca
atgccatcatccattggtggacctgttgctccctcgccttctgcactggggcctcgtcct
ggatcatatccgtcttcccctctgacatcagctccctccactccttcccatgcaagtggt
tctggtccagttagtaatggaccgcctacatttgcaccggggatgacacaaagtgggcca
ccgtttcctcctgctataggtagtatgccaaggccgttagctggacctccacaaacacca
gcaatgttatcatctaggccttcttctcagccaatgcaaatgcactctagttttggtggt
ccacctactgctgtatcatctgcctctgggcaacttgcaccgccattttctggcccacca
cagaatatggtgccccctctgggttcatccccattttcagcaccaaatacaggcatgcat
caatctataaattctccttatgggatgcagacatggcctgcacagccacagcaggttgca
ccacctcctcccgggtctatgcagcagcctccacggatgtttggaatgccaccaggacta
tctcttccaaatcaatctatggctatgagtcattcaggccaagctaaaattgatcccaac
cagattccccgtcttgctccaagtgcttctgcaattgttcatgagacccgccagggcaat
caggcaaaccctcccccgcccgcaacaagtgactatatagttaaagacactggaaattgc
agtccacgctacatgaggtgtactatcaatcaggttcctttgactgtggaccttctgtct
acatctggaatgcagctgtctctattggtccagcctttagctctcgcacatccatctgaa
gagcctatccatgttgtagattttggggaaagtggtcctgttcgatgttctcgttgcaaa
ggttacattaatcctttcgtgaagtttattgaccaaggaagacgtttcatttgtaacctg
tgtggatttacggatgaaactccacgtgactatcactgtaacttaggtccagatggccgg
cgtagagatgctgacgaaaggcctgaactatgccgaggaacagttgaatttgttgctact
aaggagtacatggttcgtgacccaatgcctgccatatttttcttccttattgatgtatcc
atgaacgctacacaaactggtgcaactgcagcggcttgcagcgccatcagacaagtgata
gccgatcttccaaagggtcctcgtacaatggtgggtattgctacgttcgattccacaatc
cagttttacaatctaaaacgatcttcacagcagccattgatgctcattgttcctgatgtt
caagatgtctatactccactggaaagtgatgtcattgttcaattttctgagtgctgtgag
catttagaaatgttgcttgacaacattcctacaatgtttgagagcaatagaattgctgat
tcagctcttggtgctgctgtaaaggctgcttttctggcaatgaaaagcactggtggcaaa
cttttagttttccagtcagttttaccgtcatgtggcatcgggtccctttctgctcgagag
gctgaaggcagaagcaatatgtcagcaggagaaaaggaggctcacaaattgcttcagcct
tctgacaagactctaaaaactatggcaatggaatttgcagagtaccaggtctgtgttgat
ttgtttattacatcacaaatgtatgtggatattgcttctctctctgttatcccaaagaca
actggaggccaggtatactactattatcctttctctgcccgttctgatcctgctaagctg
tacaatgatcttcggtggaacatcacaaggccccaagggtttgaggcagtgatgcgtgtt
agatgtagccagggtattcaagttcaagaatattccggaaacttctgtaagcgcatacca
actgacgttgatctacctgcgattgattgtgacaaaacaataatggtctccctgaatcat
gatgataaattacaggaggcctctgagtgttcttttcagtgtgcccttctttacaccact
gtacatggacaaagaagaatcagagtttcaacattgtccttgccttgcaccaacatgctc
agtaatctattccgctctgctgatctagacacccaatttgcgtgtatcacaaaacaagct
gctattgggattccgtcagctcctcttgcacaagttagggatcaagctactaatgtttgc
atcaacatcttatactcgtaccggaagttctgtgctacggtgtcattgtccggacaactt
attctgcccgaggcacttaaaatgttgcctctctatacacttgctttactcaaatgcgtt
ggattacgttctgatggaagaattgatgataggtctgtttggattaattatgtctcacca
ttacctactactttggtgatcccattggtgtaccctagaatgatagcacttcatgacctt
aatgagaaggaattagatgattccattattcccgttccaattccactttccagcgagcat
attgctattgatggaatatatcttcttgagaatggagttgattgtttgatttatgtcggt
gaagatgttcagtcaaatattttgcaacagatgtttggcatttcatcaaatgaagagatt
ccaaatcagttcattttgcagcaatatgacaatcccttgtcaaagaagctgaatgacatt
gtaaatgagataaggcgtcaacgatgttcttacctacgcttgcgactatgcaaaaagggg
gatccaacagggatgatgttcttctcgtacctggtcgaagacaagatggctaatggtttc
tcatacgtcgagtatctaatacatattcaccggcagattcaaaataaaatggcttga
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