Salvia splendens (scarlet sage): 121811138
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Entry
121811138 CDS
T07627
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03030
DNA replication
sspl03410
Base excision repair
sspl03420
Nucleotide excision repair
sspl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121811138
03410 Base excision repair
121811138
03420 Nucleotide excision repair
121811138
03430 Mismatch repair
121811138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121811138
03036 Chromosome and associated proteins [BR:
sspl03036
]
121811138
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121811138
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121811138
DNA Replication Termination Factors
ELG1-RFC complex
121811138
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
121811138
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121811138
Check point factors
HRAD17(Rad24)-RFC complex
121811138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
AAA_5
AAA_11
AAA_16
AAA_14
Mg_chelatase
AAA_assoc_2
ResIII
AAA_2
AAA_24
nSTAND3
SLFN-g3_helicase
nSTAND_NTPase5
PhoH
AAA_30
AAA_19
DUF815
AAA_28
AAA_7
RNA_helicase
Parvo_NS1
AAA_25
AAA_18
DNAX_ATPase_lid
NB-ARC
NPHP3_N
ATPase_2
TIP49
bpMoxR
AAA_17
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
121811138
NCBI-ProteinID:
XP_042067872
LinkDB
All DBs
Position
1:7510565..7518171
Genome browser
AA seq
341 aa
AA seq
DB search
MTPVLPSSQQWVEKYRPKQVKDVAHQEEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL
AIAHQLYGPGLYKSRVLELNASDDRGINVVRTKIKNFAAVAVGTAHQGGYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMTS
RILYICNEEGLNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSSITSKDLISVSGVIP
DDVVQALFIACRSGDFDMADKEVKNVIAEGYPASQMLNHLYDVVVESDDIPDDQKARICK
KFGEADKCLADGADEYLQLLDVASNITRALDNMPQEFPFGS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctgttttgccgagctcccagcaatgggtcgagaaatatcgaccgaagcaagtg
aaggatgttgcgcaccaagaagaggtcgttcgagttcttaccaacactttggagacaacc
aattgtccgcacatgctattttatggccctcctggcactgggaaaacgactacagctctt
gccattgctcatcaactttatgggcctgggttatacaagtctagagtactcgagctgaat
gctagtgatgatcgtgggataaatgttgttcgtacgaaaataaaaaacttcgctgctgtt
gctgttggcactgcacatcaaggtggttatccttgcccaccttataagatcataattctt
gatgaggctgactcgatgactgaagatgcccagaatgccttgcgacgcaccatggagaca
tactcaaaagttacaagattcttcttcatttgtaactacatcagcagaattatagaacca
cttgcatctaggtgcgcgaaattcagattcaaaccacttacagaagaaattatgacatct
cgcattctatacatctgcaacgaagaaggtcttaacttggattcagaggctctttcaacc
ttaagttctatctctcaaggtgatctgcgtcgtgctataacatatctacaaggtgctgct
cgcttattcggatcctcaattacatctaaggacttaatcagcgtgtctggtgtcatccct
gatgatgttgtgcaggccctctttattgcttgcagaagtggtgatttcgacatggctgat
aaggaagtgaaaaatgtgattgctgaaggctatccagcttctcagatgcttaaccatttg
tatgatgtagttgtcgaatctgatgacataccagatgaccagaaagcaagaatatgcaag
aaatttggagaggcagataagtgtcttgcagatggagcagacgagtacttgcaactgttg
gacgtggctagcaatataactcgtgcgctcgataatatgccacaagagttccctttcggt
agttag
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integrated database retrieval system
