Salvia splendens (scarlet sage): 59436021
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Entry
59436021 CDS
T07627
Symbol
rpoB, IQG92_pgp075
Name
(RefSeq) RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
59436021 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
59436021 (rpoB)
03400 DNA repair and recombination proteins [BR:
sspl03400
]
59436021 (rpoB)
Enzymes [BR:
sspl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
59436021 (rpoB)
Transcription machinery [BR:
sspl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
59436021 (rpoB)
DNA repair and recombination proteins [BR:
sspl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
59436021 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-GeneID:
59436021
NCBI-ProteinID:
YP_009938001
UniProt:
A0A7H1KLS3
LinkDB
All DBs
Position
Pltd:complement(23366..26578)
Genome browser
AA seq
1070 aa
AA seq
DB search
MLGDANETMSTIPGFNQIQFEGFCRFINRGLAEELYKFPKIEDTDHEIEFQFFLERYQLV
EPSIKERNAVYESLTYSSELYVSARLIWKTSRDMQEQTILIGNIPLMNSLGTSIVNGIYR
IVINQILQSPGIYYRSELDHNRISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISI
LVLLSAMGSNLREILDNVYYPEIFLSFLNDKERKKIGSKENAILEFYQQFACVGGDPVFS
ESLCKELQKKFFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGLKFGM
GTLDDMNHLKNKRIRSVADLLQDQFGLSLVRLENVVRGTICGAIRHKLIPTPQNLVTSTP
LTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
ICPIDTSEGINVGLIGSLAIHARMGYWGSLESPFYDISEKSTGSRLLYLSPDRDEYYMLA
AGNSLALNQDIQEEQVVPARYRQEFLTIAWERVHLRSIFPFQYFSIGASLIPFIEHNDAN
RALMSSNMQRQAVPLSRSEKCIIGTGLERQAALDSGALAIAERGGKIIYIDIDKILFSGN
GDTLSISLVMYERSNKNTCMHQKPQVRRGKCIKKGQILADGAATVGGELALGKNVLVAYM
PWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITNEIPHLEAHLLRNL
NKNGIVMLGSWVETGDILVGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG
GRGRVIDVRWIQKRGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMP
YLQDGKPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLV
FSELYEASKQTANPWVFEPEYPGKSRIFDGRTGSPFEQPVIIGKPYILKLIHQVDDKIHG
RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL
GTTITGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgctcggggatgcaaacgagacaatgtctacaatacctggatttaatcagatacagttt
gaagggttttgtaggttcatcaatcggggtttggcagaagaactttataagtttccaaaa
attgaagatacagatcatgaaatagaatttcaattctttttggaaagatatcaattggta
gaaccctcaataaaggaaagaaatgctgtgtatgaatcactcacatattcttctgaatta
tatgtatccgcgagattaatttggaaaaccagtagagatatgcaagaacaaactatttta
attggaaacattcctctaatgaattccctaggaacttctatagtaaatggaatatataga
attgtgatcaatcaaatactgcaaagtcccggtatttattaccggtcagaattggaccat
aacagaatttcggtctataccggcaccataatatcagattggggaggaagattagaatta
gagattgatagaaaagcaaggatatgggctcgcgtgagtaggaaacaaaaaatatctatt
ctagttctattatcagctatgggttcaaatctaagagaaattttagacaatgtttattat
cctgaaatttttttgtcttttctgaatgataaggagagaaaaaaaattggatcaaaagaa
aatgccattttggagttttatcaacaatttgcttgtgtaggcggggatccggtattttct
gaatccttatgtaaggaattacaaaagaagttttttcaacaaagatgtgaattgggaagg
attggtcgacgaaatatgaaccgaagactaaaccttgatataccccagaacaatacattt
ttgttaccccgagacatactggcggctgccgatcatttaattggacttaaatttggaatg
ggtacacttgacgatatgaatcatttgaaaaataagcgcattcgctctgtagcggatctt
ttacaagatcaattcggattgtctctggttcgtttagaaaatgtggttcgaggaactata
tgtggagcaattcggcataaattgataccgactcctcagaatttggtaacttcaactcca
ttaacaaccacttatgaatccttttttggtttacaccccttatctcaagttttagatcga
actaatccattgacacaaatagttcatgggagaaagttgagttatttaggtcctggagga
ctaacagggcgaactgctagttttcggatacgagatatccatcctagtcactatgggcgt
atttgcccaattgacacatcggagggaatcaatgttggacttattggatccttagcaatt
catgcgaggatgggttattggggatctctagaaagtccgttttatgacatttcggagaaa
tcgacggggtcacggctgctttatttatcacccgatagagatgaatactatatgttagca
gcaggaaattctttggcgttgaatcaggatattcaggaagagcaggttgttccagctcga
taccgtcaagaattcctgactattgcatgggaacgggttcatcttcgaagtatttttccc
ttccaatatttttctattggagcttccctcattccttttattgaacataatgatgcgaat
agggctttaatgagttctaatatgcaacgccaggcagttccgctttctcggtccgagaaa
tgcattatcggaactgggttggaacgacaagcagctctagattcgggggctcttgctata
gctgaacgcgggggaaagatcatttatatagatattgacaaaatccttttctcggggaat
ggagatactctaagcatttcattagttatgtatgaacgttccaacaaaaatacttgtatg
catcaaaaaccccaggttcggcggggtaaatgcattaaaaagggacaaattttagcagat
ggtgctgctacggttggtggcgaacttgctttggggaaaaacgtattagtagcttatatg
ccatgggagggttacaattctgaagatgcggtactcattagcgagcgtttggtatatgaa
gatatttatacttcttttcacatacggaaatatgagattcagactcatgtgacaagccaa
ggccctgaaaggatcactaacgaaataccgcatttagaagcccatttacttcgcaattta
aacaaaaatggaattgtgatgttgggatcttgggtagagacgggtgatattttagtaggt
aaattaacgccccaaatggtgaaagaatcctcgtatgcccccgaagatagattgttacgg
gctatactcggcattcaggtatctacttcaaaagaaacttgtttaaaactccctataggt
ggtaggggccgggttattgatgtgaggtggatccagaaaagaggaggttctagttataat
ccagaaatgattcgtgtatatatttcacagaaacgtgaaatcaaagtaggcgataaagta
gccggaaggcatggaaataaaggtatcatttcaaaaattttgccgagacaagatatgcct
tatctgcaagatggaaaacccgttgatatggtcttcaacccattaggagtaccttcacga
atgaatgtaggacagatatttgaatgttcgctcgggttagcagggggtttgctagacaga
cattatcgaatagcgccttttgatgagagatatgaacaagaagcttccagaaaactagtg
ttttctgaattatatgaagccagtaagcaaacagcgaatccatgggtatttgaacccgaa
tatccaggaaaaagcagaatatttgatggaaggacggggagcccttttgaacaacccgtt
ataataggaaagccttatatcttgaaattaattcatcaagttgatgataaaatccatgga
cgttccagtggacattatgcgcttgttacacaacaaccccttaggggaagggcaaaacaa
gggggacaacgggtaggagaaatggaggtttgggctctagaaggatttggtgttgctcat
attttacaagagatgcttacttataaatctgatcatattagagcgcgtcaagaagtactt
ggtactacgatcactggaggaacaatacctaatcctgaggatgctcccgaatcatttcga
ctgcttgttcgagaactacgatctttagctctggaactgaatcatttccttgtatctgag
aaaaacttccagattaataggaaggaagcttaa
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