Mammaliicoccus stepanovicii: SAMEA4384403_1049
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Entry
SAMEA4384403_1049 CDS
T06999
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sste
Mammaliicoccus stepanovicii
Pathway
sste03030
DNA replication
sste03430
Mismatch repair
sste03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMEA4384403_1049 (dnaE)
03430 Mismatch repair
SAMEA4384403_1049 (dnaE)
03440 Homologous recombination
SAMEA4384403_1049 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sste03032
]
SAMEA4384403_1049 (dnaE)
03400 DNA repair and recombination proteins [BR:
sste03400
]
SAMEA4384403_1049 (dnaE)
Enzymes [BR:
sste01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMEA4384403_1049 (dnaE)
DNA replication proteins [BR:
sste03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMEA4384403_1049 (dnaE)
DNA repair and recombination proteins [BR:
sste03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMEA4384403_1049 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
SNV64708
UniProt:
A0A239Z2J0
LinkDB
All DBs
Position
1:1010137..1013328
Genome browser
AA seq
1063 aa
AA seq
DB search
MVSHLNVHSSYDLLNSSIRIKEVVNKAKNENYQALALTDLNVMHGALQFYDECQQAGIKA
IFGLTIFLDDQLNQLECVLLAKDNAGYDNLIKLSSAISIKERHYVPIEWVNTYSEGLIII
AKQLNNDNEHLFNYININEDDKYISHDSNIESNHRAVFMQSALYLNKEDSDSLVALKAIK
NNEKLTISDFNTNYHHHFYAEDELTALNILQSHLNITDEIADKCTVDIKYNQDLLPKYNT
PNASNSNDYLWQLLEENKQKYPQFNKQYEDRLKYEYDIIVSMGYADYFLIVSDLINYAKS
HDVLVGPGRGSSGGSLVSYVLNITTIDPIKYDLLFERFLNPERVTMPDIDIDFQDTKRDK
VIQYVQDKYGDNRVAGIVTYGHLLARAVARDVGRILQFDEATLNYISKLIPHKLGITLNE
AYESDAFKQFVNQNHLHEKWFHLSKQLEGLPRHTSTHAAGIIINDQPLHQFVPTMMGDTG
VLTQWTMTETEKLGLLKIDFLGLRNLSIIQQVVNQVKFQEQIDIDIEKIPFDDTKVFQLL
SRGETTGIFQLESQGVRSVLKRLKPDHFSDIVAVTSLYRPGPMEEIPTYIKRRKHEETIE
YLHPDLEGILKSTYGVIIYQEQIMQIASKFAGFSYGEADILRRAMSKKNRSVLENERKHF
INGSLERGYEETTAIKIFDLILKFADYGYPKAHAVAYSKIAYIMTYLKVHYPTYFYASIL
SNVVGNESKTEQIITEMKRIGVNIFPPSINNSEWFYKATKKGIYTSLGAIKNVGYQSVKA
MIDERKSKGIYQNLHDLVHRLPSKVKNKKLIQALVYAGALDDFKLTRATLLQSIDDVYES
SESVGDANNLLAELGLNVKKEIKEVEEMPSITKSEYEREYLGFYVTDHPIITLFKENQFL
SIYPLNVQNEKVPMLVMIPSLRKIRTKKGQNMAFVNIMDGINEIEGVIFPDTYKSLDNIN
IENKPLIIQGKFEKRNDKMQLIINHLETLETYRKKKLETAKEIMVRNVTDMKEWVTKANT
SEIKITYFNDVDFTTNFIGYLNVEKGNIIDLINDLGNENVRLL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggtaagtcatttaaatgtccattcatcttatgatttattaaattccagtataagaatt
aaagaagtggttaataaagctaaaaatgaaaattatcaagcgcttgctttaacagattta
aatgtcatgcacggtgcattacaattttatgatgagtgccagcaagcgggaattaaagct
atatttggattgactatatttttagatgatcaattaaatcaattagaatgtgtattactc
gcaaaagacaatgctggttatgataatttaattaaactgtcatcggctatttcgattaaa
gaaagacattatgtgccgatcgaatgggtaaatacgtattctgaagggctcatcatcatt
gctaaacagttgaataatgataatgagcatctttttaattatataaatatcaacgaggat
gataaatatatttcgcatgattccaatatagaatcaaatcatagagcagtatttatgcaa
tctgcattatatttaaataaggaagacagtgatagtttagtagctttaaaggcaattaag
aacaatgaaaagttaacgataagtgactttaatacgaactatcatcatcatttttatgca
gaagatgagctaacagcattaaatatattacaaagtcatctaaatataactgatgaaata
gctgataaatgtactgtcgatattaaatataatcaagatttattgcctaaatataataca
ccaaatgcttcgaatagtaatgactatttatggcaattactagaagaaaacaagcagaaa
tacccacaatttaataaacaatatgaagacagacttaaatacgaatatgacatcatcgtt
tctatgggatatgcagattattttttaattgtaagtgatttaattaattatgctaaatca
catgatgtactagtagggccaggacgtggttcttctggaggttcactagttagctatgta
ttaaatattacaacaattgacccgataaaatatgatttattatttgaacgatttttgaat
cctgaacgtgtcactatgcctgatattgatattgacttccaagatacaaagagagataaa
gttatacaatatgtacaagataaatacggtgataatcgtgtggcaggtatagtcacatat
ggtcatttattagctagagcagtagcacgtgatgttggtagaatactacaatttgatgaa
gcaacactaaattatatatctaaattaattcctcataagttaggtattactttaaatgaa
gcatatgagtctgatgcgtttaaacaatttgtaaatcaaaatcacctacatgaaaaatgg
ttccacctcagtaaacaactagaaggacttccaagacatacgtcaacacacgctgcaggt
attattattaatgatcaacctttacatcaatttgtgccaacaatgatgggtgatacaggt
gtattaacgcaatggacaatgactgaaacggaaaagttaggactgttgaagatagatttc
ttaggtttaagaaacttgtctatcattcagcaagtcgtaaatcaggtgaaatttcaagaa
caaattgatattgatatcgaaaagattccattcgatgatactaaagttttccaactgtta
tcacgcggagaaacgaccggtatatttcaacttgaatctcaaggcgtgcgaagtgtgcta
aaaagactgaaaccagatcatttttcagatattgtagctgttacatcattgtatagaccg
gggccaatggaagaaattcctacctatatcaaaagacgtaaacatgaagaaacaattgaa
tatttacatccagatttagaaggtattttaaaatctacatatggggttattatatatcaa
gaacaaatcatgcaaattgcaagtaagtttgcgggcttctcatatggtgaggcggacatt
ttaagaagagcaatgagtaagaagaaccgatccgttttagaaaatgaaagaaagcatttt
atcaatggaagtcttgaaagaggatatgaagaaacgacagcaatcaaaatatttgattta
atacttaaatttgctgattatggatatccaaaagcacatgcagttgcttacagtaaaatt
gcatatattatgacttatttaaaagtacattatccgacttatttctatgcttcaatatta
tcaaatgtagttggaaatgaatctaaaacagaacaaatcataaccgaaatgaagcgtata
ggtgttaacatatttccaccatcaatcaataatagtgaatggttctataaagcaactaaa
aaaggcatctacacatcactaggtgcaattaaaaatgtcggttatcaaagcgtaaaagca
atgatagatgaacgtaaatctaaaggcatatatcaaaatctacatgatttagtgcataga
ttaccaagtaaagtgaaaaataaaaagttaattcaagccttagtttatgctggggcacta
gatgattttaagttaacaagagcaacacttttacaatctatagatgatgtatatgaaagt
agcgaatccgtcggtgatgcaaataacttattagctgaactaggattaaatgtaaagaaa
gaaatcaaagaagtcgaagagatgccaagtattacgaaaagtgaatatgaacgtgaatat
ttaggtttctatgttacagatcatccaattataactttatttaaagaaaatcaatttcta
tcaatatacccattaaacgttcaaaatgaaaaagtcccaatgcttgttatgattccttca
cttagaaaaattagaactaaaaaaggtcaaaatatggcttttgttaatataatggatggt
ataaacgaaatagaaggcgttatttttcctgatacttacaaatcattagacaatataaat
attgaaaataaaccacttatcattcaaggtaaattcgaaaaaagaaatgacaaaatgcag
ctgattataaatcatcttgaaacacttgagacatatagaaagaaaaaattagaaacagct
aaagaaatcatggtacgtaacgtaacggatatgaaagaatgggtaacaaaggcaaacact
agtgaaattaaaataacatattttaatgatgtggattttacgactaatttcataggatat
ttaaatgttgaaaagggtaatatcatcgatttaattaatgacttaggaaatgaaaacgta
cgtctattatag
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