KEGG   Solanum stenotomum: 125854284
Entry
125854284         CDS       T08385                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
sstn  Solanum stenotomum
Pathway
sstn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125854284
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sstn03041]
    125854284
Spliceosome [BR:sstn03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    125854284
 Complex B
    125854284
 Complex C
   U2 SnRNP specific factors
    125854284
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 125854284
NCBI-ProteinID: XP_049389740
LinkDB
Position
2:complement(72963598..72967221)
AA seq 803 aa
MFGTTTILPLPAPPLDGNLGPIPPAQVVEEPEDDTMEENEEDNNRANKVPTSVATHTRTI
GIIYPPPDIRSIVDKTSQFVAKNGPEFEKRIVLNNAGNAKFNFLNASDPYHAYYQHRLAD
ARAQNQASGEQPTQPDDNEAVPAPPTADGAEATAKPDPSAPFRPVRKVLEPPEAEQYTVR
LPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADA
YSKVLMPPKGLTDKLQKSAADMTTVLERCLHRLEWERSQEQARQKAEDEIEQERVQMAMI
DWHDFVVVETIDFADDEDQDLPPPMTLEEVIRRSKMPTLEEEEYVEPGKEVEMEMDEEEV
QLVEEGMRAATLEENGGIRSAEAMAIPVEQDPPMRIVKNWKRPEERILAERDPTKYVVSP
ITGELIPINEMSEHMRISLIDPKYKEQKDRMFAKIKETTLAQDDEISRNIVGLARTRPDI
FGTTEEEVSNAVKAEIEKKTEEPKQVIWDGHTGSIGRTANQAMSQNSDEQNDAANDARNF
PGPQAPPPPRPGFPSIRPLPPPPGLALNIPRPPNTVQYSAPGVAAPPPPRPPMVNMIPQV
RPPPPPMPQMPGQQNLMVNRPPMPPSMGMNSHSLPIPPPPGSQFTPLGAPRPFVPHPMSQ
PGMSMVPPPPMPQGMPPPPPPEEAPPLPEEPEPKRQKLDESILIPEDQFLAQHSGPARIN
VSVPNTDEGNLKGQVLEITVQSLSETIASLKEKISGEIQLPANKQKLSGKAGFLKDNLSL
AYYNVASGETLGLSLRERGGRKR
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgtttggcaccacaacaatattgccccttccggctcccccgttggatgggaatctggga
ccaatacctccagctcaggtggtagaggaaccagaggatgataccatggaagagaatgaa
gaggacaacaatagagccaacaaggttccaacatctgttgctacacatacgagaactatt
ggtatcatttaccctcctccagatattagaagtattgttgataaaacttcgcagtttgtt
gcgaagaatggtccggaatttgagaagagaattgttctaaataacgctggcaatgcaaaa
tttaacttcttgaatgcctctgatccttaccatgcctattatcagcaccgtttggctgat
gctcgcgcacagaatcaggcttctggagagcagcctactcagccagatgacaatgaagca
gtccctgctcctcctaccgctgatggtgctgaggcaactgctaaacctgatccatcagct
ccgtttagacctgtcagaaaggttctcgagccacctgaggcagagcaatatactgtaaga
ctccctgaagggatcacaggtgaagaactggatattattaagcttacagcacaatttgtg
gccagaaatgggaagtctttcttaacagggttaacaagcagggagattaataatccccaa
tttcattttctaaagcctactcacagcatgttcatgttttttacttcacttgcggatgcg
tattcaaaagttctgatgcctcccaaaggcttgacggataagctgcagaagagtgctgct
gacatgacaacagtcctagagcgatgtctgcatcggttggaatgggaaaggtcacaggag
caggctagacaaaaagctgaagatgagatagaacaggagagggtgcagatggctatgatt
gattggcatgattttgttgttgttgagactatagattttgctgatgacgaggatcaggat
ttacctccacctatgaccctcgaggaggttataaggaggagcaagatgcctacattggag
gaagaagagtatgttgagcctggaaaagaggtggaaatggagatggatgaagaagaggtg
cagctagttgaagaaggtatgcgagctgcgactcttgaagagaatggtggtatcaggagt
gctgaagccatggcaattccagtggaacaggacccaccaatgcggattgtgaagaactgg
aagaggcctgaagagaggatcctggcagaaagggacccaactaagtatgttgtctctcct
ataaccggtgagctaatacctattaatgagatgtctgaacatatgaggatctctctcatt
gatccaaagtataaggaacagaaggacaggatgtttgcgaagattaaggagacgactctt
gcgcaggatgatgagatttctaggaacattgttggacttgcaagaacccgtccggatata
tttggtaccacggaagaagaagtttcaaatgcggtcaaggctgagattgagaaaaagacg
gaagagccgaagcaagtcatatgggatggtcacacaggtagcattggtcgcactgcgaac
caggcaatgtctcagaacagtgatgaacagaatgatgctgcaaatgatgcaagaaacttt
cctggaccgcaggctcctccacctcccagacccggttttccatctattaggccactacct
ccaccacctgggcttgcactgaatattcctaggcctcctaatacagtccagtattctgct
cctggggttgctgctccgcctccacctcgacctcctatggttaacatgattcctcaggtt
cggcccccacctcctcccatgccacagatgccaggtcagcaaaatctcatggtgaatcgc
cctccaatgcctccatcgatgggtatgaattctcatagccttccaattccaccacctcct
ggatcacagtttacacctttgggagcacctcgaccctttgttccccacccgatgtcccag
cccggaatgtctatggtcccgccgcctcctatgccccaaggaatgccgccaccccctcca
cctgaggaagcccctcctctccctgaagagccagagccgaagaggcaaaagcttgatgag
tctattctcattcctgaagaccagttcttggctcagcactcgggacctgcaaggatcaat
gtatctgtgccgaatactgatgaagggaatctcaaaggacaggttctggaaatcacagtg
caatctctgtccgaaaccattgccagtctaaaagagaagatttctggggagatccagctg
cccgcgaacaaacaaaaactgagtggaaaggctggttttctcaaggacaacttgtctctt
gcgtactataatgttgcatctggagaaacactcggtctctcactaagagaacgtggtggg
agaaagagatga

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