KEGG   Solanum stenotomum: 125854356
Entry
125854356         CDS       T08385                                 
Name
(RefSeq) cell division cycle 5-like protein isoform X1
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
sstn  Solanum stenotomum
Pathway
sstn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125854356
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sstn03041]
    125854356
   03400 DNA repair and recombination proteins [BR:sstn03400]
    125854356
Spliceosome [BR:sstn03041]
 Complex B
  Other components
   Prp19 complex
    125854356
 Complex C
   Prp19-CDC5 complex
    125854356
DNA repair and recombination proteins [BR:sstn03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    125854356
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect DUF4953
Other DBs
NCBI-GeneID: 125854356
NCBI-ProteinID: XP_049389833
LinkDB
Position
2:complement(64366185..64371532)
AA seq 1002 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACTKDENYDPNDDPR
KLKPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDVRQRKRKRRGIDYNAEIPFEKKPPPGFYDITEEDRPVDQPKFPT
TIEELEGERRVDKEARLRKQDVARNKIAERQDAPTSILHANKLNDPEAVRKRSKLNLPAP
QIPDHELEAIAKIGIASDLIGGDELSEGNAATRALLANYAQTPQHAMTPMRTPQRTPSTK
QDAIMMEAENQRRLTQSQTPLLGGDNPLLHPSDFSGVTPKKREVQTPNPLLTPSATPGAM
SLTPRIGMTPSRDSYGMTPKGTPMRDELRINEEMDMHNNAKLGQFNSKKELLSGLKSLPQ
PKNEYQIVVQQPPEENEEPEEKIEEDMSDRIAREKAEEEAKRQALLRKRSKVLQRELPRP
PIASLELIKSSLMRADEDKSSFVPPTLIEQADEMIRKELVSLLEHDNTKYPLDEKPEKEK
KKGVKRKIVAEPAIEDFEEDELKEADGLIKDEAHFLRVAMGHESESLDEFVEVHKTTLND
IMYFPTRNAYGLSSVAGNMEKLAALQNEFENVKKKMDDDTKKATKLEQKIKVLTNGYQMR
AGKLWSQIESTFKKMDTAGTELECFRALQKQEQLAASHRINNMWEEVQKQKELERTLQKR
YGDLIADTQKIQHLMDEYRIQDQMQEEIAAKNRALELAKAEIAEKESIPSADDVEPSGTV
QCSNPEENSASASHVPIEADVHVEPSGIDQCSNAEENSASIEADNVHVEPSGTSQCPIAE
ETSASVSHDTTPQDVEGQVQVADVSTMDAEALSDHVPMEGQQNLVEESNTDVTKTEDSTV
ASDYVDVTKTEDSTVAAGDVDVTKTDDSVVVAGDGEANPKNM
NT seq 3009 nt   +upstreamnt  +downstreamnt
atgaggattatgataaagggaggagtatggaagaacacggaggatgagattctgaaggcg
gctgtgatgaagtatgggaagaatcagtgggctcgtatttcttctttgcttgttcgtaaa
tctgctaagcagtgtaaagctcgctggtatgaatggctcgatccttcaattaagaagact
gaatggactagagaggaggatgaaaaactacttcaccttgcaaaactcatgcccactcaa
tggaggacaattgcgccaattgttggccgtacaccatcacagtgccttgaacgttatgag
aagcttctcgatgcagcatgtactaaggatgagaactatgatcctaatgatgatccaaga
aaattgaagcctggagagattgatcctaacccggaatccaagcctgctcgtcctgatcct
gttgatatggatgaggacgagaaagaaatgctttctgaagcacgggctcggttggccaac
acaagaggcaagaaggctaaaaggaaagccagagaaaagcagcttgaagaggcgcgaagg
cttgcttctttacagaagaggagagaactcaaggctgctggaatagatgtccgtcaaagg
aagagaaaaaggagaggtattgattacaatgctgaaatcccctttgaaaagaagcctcct
ccaggtttctatgatatcactgaggaagaccgtccagttgatcaacctaagtttccaact
accattgaggaactggaaggtgaaaggagagtcgataaggaagctcgcctaagaaagcag
gatgttgcgaggaataaaattgcagaaaggcaggatgcccctacatccatattgcatgcg
aacaaacttaatgatccagaagcagtgaggaagaggtcgaaactgaatcttcctgcacca
cagattccagatcatgaattggaggccatagcaaagataggtattgccagtgatctaata
gggggtgatgaattgtccgaagggaatgctgcaacgcgtgctcttcttgcaaattatgcc
cagacaccacagcatgcaatgactcctatgcgaacacctcaaagaaccccatcaactaag
caagacgccattatgatggaagcagaaaatcaacgaagattgactcaatctcaaacacca
ttacttggaggtgataatcctttgttgcacccctcagatttctcgggtgtcactcccaag
aaaagggaggttcaaactccaaacccacttttaactccatcagcgactcctggagccatg
agccttactcctagaattggcatgacaccttcgagagattcttatgggatgacacccaaa
ggaactcccatgagggatgagctacgcattaatgaagaaatggatatgcataataatgct
aaactggggcaatttaattcaaaaaaagaattgctttctggtttgaaaagccttcctcag
cccaagaatgagtaccagatagtcgtccaacaacctcctgaagaaaatgaagaaccagaa
gagaagattgaagaagacatgtctgataggattgccagggagaaggctgaagaagaagca
aagcgacaagcattactccgtaaaaggtcaaaagtattgcaaagggagctccctagacct
cccattgcttctctagaactaataaagagttccttaatgagagctgacgaagacaagagc
tcctttgttcctcctacactaattgagcaggccgatgaaatgattagaaaggaacttgtg
tccttgctagaacatgataataccaagtaccctctagatgagaagccagagaaggagaag
aaaaagggggtcaagcgaaaaattgttgctgaacctgctattgaggattttgaggaagat
gaattaaaagaggctgatggattgatcaaggatgaggctcactttcttcgtgtggcaatg
ggacatgagagtgaatctcttgatgaatttgtcgaagtacacaaaacaactttgaatgat
atcatgtactttcctacccggaatgcttatggtctctcaagtgttgctggaaacatggaa
aagctggctgctttgcagaatgagtttgagaatgtgaagaagaaaatggatgatgatact
aagaaagcaacaaaacttgagcaaaagatcaaagttcttactaatggatatcagatgcga
gctggaaaactttggtcacagatagagtcaacctttaagaaaatggacactgcagggaca
gagcttgaatgcttccgagcattacaaaaacaagagcagctagcagcatcccacaggatc
aacaatatgtgggaagaagttcagaagcaaaaggagcttgagcgtactttacagaaaagg
tacggtgacctcatagcagatacgcaaaagatccagcatctcatggatgagtatagaata
caagatcaaatgcaggaagaaatcgcagcaaaaaatcgtgctcttgagttggccaaggca
gaaattgcagaaaaggagagtataccatctgctgatgatgtggaaccttcaggtaccgta
cagtgctccaatccagaggaaaattctgcttctgcctctcatgtaccaatagaagctgat
gtgcatgtagagccttcaggtatcgaccagtgctctaatgcagaggaaaattctgcttct
attgaagctgataatgtgcatgtggagccctcaggtactagccagtgccccattgcagag
gaaacttctgcttctgtctctcacgacacaactcctcaagacgttgagggacaggtgcaa
gtggctgacgtttccacaatggatgctgaagccctaagtgaccatgtacctatggagggt
cagcaaaacctagtagaagagagtaatacagatgtcactaaaacagaagactctacagta
gcatcagattacgtggatgttactaaaacagaagactctacagtagcagcaggtgacgtg
gatgttactaaaacagacgactctgtagtagtagcaggtgatggtgaggctaatcccaaa
aacatgtaa

DBGET integrated database retrieval system