Solanum stenotomum: 125858319
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Entry
125858319 CDS
T08385
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
sstn
Solanum stenotomum
Pathway
sstn04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
125858319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstn03000
]
125858319
Transcription factors [BR:
sstn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
125858319
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
HGTP_anticodon2
Dicty_REP
DUF1690
Anillin_N
Motif
Other DBs
NCBI-GeneID:
125858319
NCBI-ProteinID:
XP_049394032
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Position
3:18049718..18052496
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AA seq
351 aa
AA seq
DB search
MDGDQSLSDLFEDSECDIFSILEALEGGGGGGGGGGSSSINSEFYNNTNNQTTTTTTTTT
SDEITGLVSEEGRKRKLVSQKSTGSSATLQEEETHEADTPSSKRQNLAAVISGGIENKIS
HITVERNRRKQMNEHLSVLRTLMPCFYAKRGDQASIIGGVVDYINELQQVLQSLEAKKQR
KVYSEVLSPRILPPQLVPISPRLITPSPLSPRKPPLSPRMNLPISPRTPQPTSPYKPNKA
NKTLEPSPTTSSNSSIDSHVNNELAANSKSAIADVEVKFSGANVILKTVSPRIPGQAVKI
IAALEHLALEILHVSISTIDGTMLNSFTIKIGIECQLSAEELAHQIQQTFC
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgaccaaagtttatctgatttatttgaagattctgaatgtgatatcttcagt
attttagaggctttagaaggcggtggaggtggaggtggaggtggaggtagtagtagtatt
aattcggaattttataataataccaacaaccagactacaacgacgacgacgacgacaacc
tctgatgaaattacgggtttggtgtctgaagaagggaggaagaggaagttagtttctcaa
aaatctacgggttcgagtgcaactttacaagaagaggaaactcatgaagctgatacacca
agtagtaagaggcaaaatttagcggcggttataagtggtgggatagaaaataagatttct
catataacagttgaaaggaaccgccgcaaacaaatgaatgaacatctatctgtgctacgc
actttgatgccttgtttttatgctaaacgaggtgatcaagcatcaataattggtggggtt
gttgattacataaacgagctacaacaagttctccaatccttagaagccaagaaacaacgc
aaagtttatagtgaagttttaagtccaagaatactaccaccacaactagtcccaattagt
ccaagactaataacaccttcaccattaagtccaagaaaaccaccacttagccccagaatg
aacttaccaattagcccaagaaccccacaacccacaagtccatataagcctaataaagct
aacaagacacttgaaccatctcctactacttcatcaaattcttccattgatagtcatgtc
aataatgaactggctgctaattcaaaatcagccattgctgacgtggaggtgaaattctct
ggcgcgaatgtcatattgaagaccgtttctccacgtattcctggccaggctgtgaagatc
attgctgctttagaacatctcgcacttgaaatactccatgttagcatcagtactattgat
ggtaccatgctcaactccttcaccattaagattggaattgaatgccaacttagtgctgaa
gaactggctcatcagattcagcagacattctgctaa
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