Solanum stenotomum: 125859681
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Entry
125859681 CDS
T08385
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125859681
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125859681
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125859681
NCBI-ProteinID:
XP_049395434
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Position
3:complement(11133084..11134919)
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AA seq
403 aa
AA seq
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MATSSVFILFLLSFLLLLPSLLASSNPQQVIDEVHRSINGSRRNLGYLSCGTGNPIDDCW
RCDPNWEKNRQRLADCAIGFGKNAIGGRDGKIYVVTDSGDDNAVTPKPGTLRHAVIQTEP
LWIIFARDMVIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGIHIHDCKQ
GGNAMVRSSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCMDGLIDAIMGSTAITISN
NYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
MYAIGGSADPTINSQGNRFLAPDIRFSKEVTKHEDAPESEWKNWNWRTDGDLMLNGAFFT
RSGAGASSSSYAKASSLSARPSSLVGNLVSSSGALNCKKGSRC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggccacttcctctgttttcatactattcctcctttcttttcttctccttctcccgtcc
ctccttgcctcctctaatcctcaacaagttatcgatgaagtacataggagcataaatggt
tcaaggaggaatttaggttatttatcgtgtggaaccggaaatccaatcgacgattgctgg
cgttgtgatccaaattgggagaaaaaccgtcagcggttagctgactgcgcaattggattt
gggaaaaacgctattggtggtagagacggtaaaatctacgtggtgactgattcgggtgac
gacaatgccgtcacaccaaagccggggactctccggcacgcggtcattcagactgagccc
ttgtggattattttcgcaagggacatggtgatacaattaaaagaagaattaattatgaat
tcgttcaaaactatagacggaaggggcgctagcgtacacatagctggtggtccgtgtata
acaatacagtacgtaacgaatattattatacacggaattcatatacatgattgtaaacaa
ggtggaaatgctatggtgcggagcagtccatctcattacgggtggagaactatttctgat
ggtgatggagtgtcgatatttggtgggagccatgtttgggtagatcattgttctttgtct
aactgtatggacggcctgattgacgcaattatggggtctacagcaattaccatttcaaat
aattacatgacacaccatgataaagttatgcttttgggacatagtgattcatatactcaa
gataaaaacatgcaagtcactattgcttttaatcactttggagaaggccttgtccaaaga
atgccaagatgtagacatggttacttccatgtggtgaacaatgactacacacattgggaa
atgtatgctattggtggaagtgctgatcccactatcaatagtcaagggaacagatttctt
gcccctgatatcaggtttagcaaagaggttacaaaacacgaggatgcaccggagagtgaa
tggaagaattggaattggaggaccgacggggacctaatgttgaatggtgcattttttacg
cggtcaggagccggagctagttcatcaagttatgctaaagcttcgagtttgagcgcaagg
ccgtcttcattagtaggcaaccttgtgtctagttctggagcgctcaattgtaaaaagggt
tctcgttgctga
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