KEGG   Solanum stenotomum: 125859836
Entry
125859836         CDS       T08385                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
sstn  Solanum stenotomum
Pathway
sstn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125859836
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sstn03041]
    125859836
Spliceosome [BR:sstn03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    125859836
 Complex B
    125859836
 Complex C
   U2 SnRNP specific factors
    125859836
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 125859836
NCBI-ProteinID: XP_049395624
LinkDB
Position
3:complement(17728411..17737215)
AA seq 509 aa
MSSTLLEVTRASHEEVERFERLIVKDLQTEPATNKDRLHQSHRVRNMIEQIIDTTHKLVD
IYEDKDGARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRRHPAARAIIDTGDEYELL
LKEEPQIEFSGEEGSGRYLDLHELFNEYINSKFGEPIEYTAYLNVFSEPQKIPRKAKTTR
QYLEYLQKLLEYLVYFFERTEPLQDLDRIFSKVTSEFEEEWTLGKVEGWENSGQENGSAP
ENHTVIDLDYYSTAEELMVVGPEKLKEALGALGLKTGGTIQQRAERLFLTKNISLEKLDR
KHFAKGSGKPEQNGVVATPQVGDVKEIALLEAKIRRLCDLLDETIVRTRENVEKKQALTY
EEMEAEREEDDVQAESESDDEDQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICG
NHSYWGRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKLLWERIQERQGVNKWR
PDLEEEYEDQEGNIYNKKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcgtcgactctactggaggtgactcgtgcatcgcacgaggaagttgagcggttcgag
cgccttattgtgaaggatctccagactgagccggctactaacaaggaccggctccaccag
agccaccgcgttcgtaacatgatcgagcaaatcattgacaccacacacaaactggtagat
atatatgaagacaaagacggagcgaggaaggatgaaattgcagctctgggaggccagaca
gcaactggaacaaatgtgtttagtgcattttatgaccgattgaaagagattcgtgagtac
catagaaggcatcctgctgcacgtgctattattgatactggtgatgaatatgagctgctc
ctcaaagaagaaccacaaattgagtttagtggcgaggaaggttctgggcgatacctagac
ttacatgaattgtttaacgagtatatcaactccaaatttggtgagccaattgaatacaca
gcttatcttaatgtattttccgaaccacagaagattcctcgtaaagcaaagacgactagg
cagtacttagaatatttacagaaactattggagtatctggtctatttttttgagcggacg
gagcccttgcaggatcttgataggatattttcaaaggtaacaagtgaattcgaagaggag
tggactttgggcaaggtagaaggatgggaaaatagtggtcaggaaaatggaagtgctcca
gagaatcatactgtgattgatcttgattattatagtacagctgaggagctgatggtagtg
ggaccagagaagttaaaggaggcattgggagcactgggactgaagacaggaggtactatt
cagcaacgtgctgagagacttttccttacgaagaatatctcgctagaaaaactagacaga
aagcatttcgcaaaaggctcggggaaaccagaacaaaacggtgttgttgcaactcctcaa
gtgggtgatgtaaaagagattgctcttctggaagccaagataagaaggctatgtgatctg
ttggatgagacaattgtgcggacaagagaaaatgttgagaaaaagcaggctttgacatat
gaagaaatggaggcagaacgtgaagaggacgatgttcaggctgagtctgagagtgatgat
gaagaccaacaaatttataatccactgaaattgccaatgggctgggatgggaaacctatt
ccgtactggttgtataaacttcacggtcttggtcaggagttcaagtgtgagatatgtggg
aaccatagttactggggccgtagggcttatgagcggcatttcaaggaatggagacatcaa
catgggatgcgttgtctcggtatcccaaatactaagaacttcaatgagatcacatcaatc
gaagaagccaagctactttgggaaagaatccaagaaagacaaggggtgaataagtggcgc
cctgatcttgaagaagaatatgaagatcaagagggcaacatctacaacaaaaagacatat
actgatcttcaacgccagggattgatatag

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