Solanum stenotomum: 125861836
Help
Entry
125861836 CDS
T08385
Name
(RefSeq) protein GFS12 isoform X1
KO
K17601
WD repeat-containing protein 81
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sstn01009
]
125861836
Protein phosphatases and associated proteins [BR:
sstn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125861836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beach
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
WD40
Pkinase
Beta-prop_WDR3_2nd
Beta-prop_THOC3
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
PK_Tyr_Ser-Thr
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_ACSF4
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_EIPR1
RAB3GAP2_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
125861836
NCBI-ProteinID:
XP_049397673
LinkDB
All DBs
Position
4:433542..444012
Genome browser
AA seq
1662 aa
AA seq
DB search
MGREMCFECLQRRIQSDFSDQLIFCYGVSNSPLPFGSTAIVQALSSNGEGLPQFMLTYMP
LCKDSCLANYIDQHYLEDLEARTNSGSGCAVPVAIDQAKAEVSVGLSSDKTSSLETRSSE
CEDLQNGGRHKSLYGLGCQNVTCNFSGTFSCFRTLPALAPVARIGISSSSLVEGIVSEFL
SGSLEDHILNSLTLMIEGKRSGLESVNFLSLVGIPSFGEEQFPGCIRHPNISPTLGMLKN
SGQLNLLLPKMPHTLENILHFSPGALKSDWHMRYLLFQILSGLAYMHGLGVFHGNVCPSS
ISLVDSLWCWLPICSKFLQNSVSISKIEGSCDSGVSCCFDGCPLQGLYADLNLSQSTDWY
SSFKRWWSGDISNFEYLLILNQLAGRRWGDNTFYIVMPWVIDFSVKPDENNDTGWRDLTK
SKWRLAKGDEQLDFTYSTSEIPHHISDECLSELAVCSYKARRLPLTVLRMAVRSVYEPNE
YPSTMQRLYQWTPDECIPEFYCDTQIFYSIHSGMSDLAVPSWAGTPEEFIKLHRDALESD
RVSHQLHHWIDITFGYKLCGDAAVAAKNVMLPSSAPTKPKSVGRRQLFTKPHPPQRLAKT
SEEEMNQLPTSDLTEHALTFETSFLHELEEAAAFSEHAPHLDPIYNLHPDVHEELDSPGK
GLSTKTLENNMSRKTGSSTSSVMPSVIDVNYLIKNIEVGDDVSVGYQALLLWKQRCSHSH
IYSKDVANDIFAVGCILAELHLRRPLFDPTSLTVYLESGVLPSLVQQLPPDTQVVVESCI
QKDWRRRPTAKCLLDSPYFLATIKSSYLFLAPLQLIAKDESRLHYAAAFAQQGALKAMGT
FAAEMCAPNCLKLVSNPLSDSEAEWGCIVLTEFLRCLDPEAVKKLVVPAIQKILQGTGPS
HLKVSLLQGSFVLDIWNKIGKQAYVETIHPFVVLNLHGTPCKNSAAAASVLLIGSSEELG
IPITVHQTILPLLHCFGKGLSDDGIDVLVRIGSLFGEDFIVKQILPLLRIVIISCIDNSF
ANKHETAQSWSALALIDTLKTLDGLTASLTPEVLVKELVEDGKFLYLQVLMQTNLGTQVF
EGAARNLLALCQQIGSDLTALRVLPKLRQLFDELAFSQEKAGHSSIKGGSLRGPNTKGED
ENKITSRLDLVVLLYPSFASLLGIEKLRQCCATWLLLEQFLLRHYNWKWESTGESSRSGP
SSIYARKPSGESLTSKRTPDKMLLNGLGWSTPQSQGKKGAKPPMINIHPSSQHQDSADRN
ARGSDFSRIEPWYWFPSPAANWSGPDFIGRPGGSKDELPWKIKASVLHSVRAHQGLLRSI
AVCQDECNLFTAGVAPGFKGTVQKWELSRIDSVSGYYGHEEVVNDISLLASSGRVASCDG
TVHVWNGQTGKLISVFAEFSTSSVHHTSSLPKASKLNVEQANMLHFNPLSGGLLNTDGNL
YTSMYYSEYLDNIVVGTGNGSLRFIDVRQGQKLHLWRTEATESNFPSLISSICSSASTKQ
QYGNPQYPSWVAVGQSSGHCRLFDVRSDKIISSWQAHDGYVTKIATPEEHLLVSSSHDRT
LKIWDLRRNWKSKPLASRGHTDGVSDFSIWGQNVISIFRSKIGLSSLASSSDEDVQQLVT
PQYLYMGDRESKNASVLSSISVLPFSRLFVVGTEDGHLKICC
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atgggaagagaaatgtgttttgagtgtttacagcgtcgaattcaatcagatttctctgac
caactcatcttctgttatggtgtttctaattcacctcttccctttggttctactgctatt
gttcaggcattaagttcaaatggagaagggttgccacagtttatgctgacttatatgccc
ctttgtaaagatagttgcttggctaattacattgatcaacattatttggaagatcttgaa
gccagaacgaatagtggcagtgggtgcgcagtcccggtggcgattgatcaggctaaagct
gaggtcagtgttggactttccagtgataaaacttcttctttagaaactagatcatctgaa
tgtgaagatttgcagaatggtggcagacataaatccctatatggcttagggtgtcaaaat
gtgacctgtaatttttctggtacattttcttgctttaggacactgcctgccctggctcca
gttgctcggattgggatttcttcatcttcattagttgaaggtattgtttcagagttcttg
tctggatcacttgaagatcatattttaaattctcttactctcatgattgaaggtaaaaga
tcaggattagagagtgtgaactttcttagtttagtggggattccttcatttggggaagaa
caatttcctggctgcataaggcatccaaacatttctccaactttgggaatgctaaaaaat
tctggtcaacttaatttgttgcttccaaaaatgccacataccttggaaaacattcttcac
tttagccctggtgccttaaagtctgactggcatatgcgatatttactcttccagatacta
tcaggattggcgtacatgcatggtttaggtgttttccatggtaatgtctgtccatccagt
atatcattggttgattccttatggtgttggctacccatttgtagtaagttcctccagaat
tctgtttcaatttccaaaatagagggtagttgtgattcaggagttagttgctgttttgat
gggtgccctttacaaggtctttatgctgatctaaacctctcccagtctacagattggtat
tctagctttaaacgttggtggagtggtgatataagtaacttcgaatatctgttaatctta
aaccaattagccgggagaagatggggtgataacaccttttatattgtaatgccatgggtc
atagattttagtgtgaaacctgatgagaataatgacactggatggagagatttaactaag
agcaaatggcggctggcaaagggtgacgagcaattggacttcacatattcgacatctgaa
attcctcatcatatatcagatgagtgcctgtctgagctggctgtctgcagttataaggca
aggaggttgcctttgactgttctgaggatggctgttcggtcagtttatgaaccaaatgaa
tatccttctactatgcaaagactatatcaatggacaccagatgagtgcattccggaattt
tattgtgatacccagatattttattctatacattctgggatgtctgatttagctgtgcct
tcatgggctggaacccctgaggagttcatcaagttgcatagagatgctttagaaagcgat
agggtatcacaccaactacatcattggattgacatcacttttggctacaaattgtgcggt
gatgctgctgttgctgctaaaaatgttatgctgccctcatccgctcctacaaaaccgaag
tcagtgggacgccgccaactctttactaaaccacatcctcctcaacggctggctaagacc
agtgaagaagaaatgaatcagctcccaacaagtgatttgactgagcatgctctgactttt
gaaacttcattcttgcatgaattggaagaagcagctgcgttttctgagcatgcacctcat
ttggatcctatctacaacttgcatccagatgttcatgaagagcttgactcacctgggaaa
ggcctatcaactaaaacattagagaataatatgtccagaaaaactggttctagtaccagt
tctgtcatgccatctgttattgatgttaattaccttatcaagaatattgaagtgggtgat
gatgtatctgtgggatatcaagcactattgctttggaagcagagatgttcccattcacac
atttattctaaagatgttgctaatgatatctttgcagttggctgcatcttagcagaactc
cacttgagaaggccactttttgatccaacctctttgactgtgtacttagagagtggtgtc
ttaccttctttagtacaacagcttccccctgacactcaagttgttgttgaatcctgcatc
caaaaggattggaggaggaggcctactgccaaatgtcttttggactctccttattttcta
gcaacaatcaagtcatcctatttgtttcttgccccccttcaacttatagcaaaagatgaa
tcacgactgcattatgctgcagcttttgctcaacagggagccttgaaagcaatgggaaca
tttgctgccgaaatgtgtgctcctaactgtttgaaattagtctcgaatcctttatcagat
tcggaagctgaatggggttgcatagtacttacagaatttttgaggtgtctagatccagaa
gctgtaaagaagctggtcgtacctgctatccagaagattcttcaggggaccggtccgtca
catttgaaggtttctcttctccaaggttcctttgtgctggatatatggaacaagattggt
aaacaagcatatgtggagacaatacacccatttgtggtattaaacttacacggtactcct
tgcaagaactctgctgctgctgcttctgtcctgttgattgggtctagtgaggaacttggt
attccaattactgttcatcagacaattttgcctctgcttcactgctttggcaaagggctc
agtgatgatggaattgatgtcttagttagaattggtagtctttttggagaagatttcata
gtcaaacagattctaccattactaagaattgtcattatttcgtgcattgacaattcattt
gcaaataagcatgaaactgcacagagttggagtgctttggccctaatcgacactctaaag
actttagatggtctcactgcttccttgaccccggaggtgcttgttaaggagcttgttgaa
gatggaaaattcttatatcttcaagttctcatgcaaaccaacttaggaactcaagtcttc
gagggtgctgcaagaaatctgctagctctttgccagcaaattggatcagatttaacagcg
ttgcgcgtccttccaaaactcaggcaactttttgatgagcttgcgttctcccaggagaaa
gcaggtcattctagcatcaagggaggaagccttcgaggtcccaacaccaagggggaagat
gagaacaaaattacaagccgtttggaccttgtggtgcttttatatccatcatttgcatct
cttcttggtatagagaagcttcgccaatgttgtgccacatggttgctactagagcagttt
cttctgcgccattataactggaagtgggaatccacaggggaatcttctcgaagtggtcca
tctagtatatatgctagaaagccgagtggtgagagcttaacatctaaacgtactccagat
aagatgttgctgaatgggttagggtggtcaacgcctcaatcacaaggaaaaaagggtgcc
aaacctcctatgatcaacatccatccatccagccaacatcaggattctgctgataggaat
gcaagaggctcagattttagcaggattgagccctggtattggttccccagtccagctgct
aattggagtggccctgattttattggccgtcctggtggttcaaaggatgaacttccatgg
aaaatcaaagcatcagttctgcactctgttcgagcacatcaaggattgctaaggtctata
gcagtctgccaagatgaatgcaatcttttcactgctggagttgctccaggattcaaagga
actgttcaaaagtgggagttgtcaagaattgattccgtatctggttattatggccatgag
gaggttgtgaatgacatttctcttttggcatcaagtggaagggtagcttcctgtgatggg
acagtacatgtatggaatggccaaacagggaagctgatatctgtgtttgctgagttttct
acaagctctgtgcatcatacaagctctttaccaaaagcttcaaagttgaatgtggaacag
gctaatatgctacattttaatccattgtctggtggactattgaacactgatggtaattta
tacactagtatgtattactcggaatatctggacaatattgttgtgggtactggaaatgga
tctctcagattcattgatgtcagacaaggtcaaaaacttcatttatggaggactgaagca
actgaatccaattttccttctctgatttcatccatatgctcaagtgcttcgactaaacag
caatacggaaatcctcaatatccatcttgggttgctgttggacaaagttctgggcattgc
aggttatttgatgtgaggagtgacaaaattatttcctcatggcaagctcatgatggttat
gtcactaagatagccacaccggaagagcatttgctggtttcaagctctcatgaccgcacc
ttaaagatttgggacttgagaagaaattggaaatcaaaacccttggcttctagaggtcac
actgatggtgtttctgatttctccatttgggggcaaaatgtgatttcaattttccgcagt
aaaattggtctttcttctttggccagttcttctgatgaagacgttcagcaacttgtcacg
cctcagtatctctacatgggtgatcgtgaatcaaagaacgcgtctgttttatcaagtatc
agtgttctacctttttcgcggctctttgtggttggaacagaagatggtcatttgaagatc
tgttgctag
DBGET
integrated database retrieval system