Solanum stenotomum: 125862494
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Entry
125862494 CDS
T08385
Name
(RefSeq) pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125862494
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125862494
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
FtsZ_C
Motif
Other DBs
NCBI-GeneID:
125862494
NCBI-ProteinID:
XP_049398540
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All DBs
Position
4:8474978..8476785
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AA seq
324 aa
AA seq
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MTNNIGDDVVKYKVTDKSDDPLNPKPGTLRYAMTHIKGKIWVTFEQNMKIRLQKPLLVSS
FTTIDGRGVKVNIAGGACLMLQRVTNVIIHGLRIHHCKAQTASIVMGPDKKIVNVGAVDG
DAIRMVTSSKIWIDHNTLYESEDGLIDVTRGSTNITISNNWFRTQNKVMLLGHDDGFLRD
KNMKVTVAFNYFGPNCNQRMPRVRHGYAHVVNNVYKGWGNYAIGGSMNPSIKSQANYFYA
PKDGKKEVTWKKESDVVGEVAGNFQSVEDVFANGACFNGSGSGRESVKPNYSPEQAFPVE
DGHKVKDLTRNAGALKCSTSSSTC
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgactaataatattggagacgacgtagtaaaatacaaagttactgataaaagtgacgat
cccttaaaccctaaacctggaaccctaagatatgcaatgactcatattaagggaaagatt
tgggtaactttcgaacaaaatatgaaaattagactccaaaaaccccttttagttagcagc
tttactaccattgatggccgtggagttaaggttaacattgctggtggcgcttgtctaatg
cttcaaagggtgacaaatgtgatcattcatggtctaagaatccaccattgcaaggcacaa
actgcctcaatagtcatgggacctgataaaaaaattgtaaatgtgggtgcagtggatggg
gatgctattagaatggtgacttcttcgaagatttggattgatcataacaccctctatgaa
agtgaagatggtctgattgatgtgactcgtggttcaacaaatataactatatccaacaat
tggtttaggacacaaaataaggttatgttattaggtcatgatgatggattccttagagac
aaaaacatgaaggttactgttgcattcaactattttggtcctaattgcaaccagagaatg
ccaagggttcgtcatggatatgcacatgtggttaacaatgtatacaagggatggggtaac
tatgcaatagggggaagcatgaacccaagcattaagagccaagctaattatttctatgca
ccaaaagatggaaagaaagaggtcacatggaaaaaagagagtgatgtagttggtgaagtg
gctgggaatttccagtcagttgaagatgtatttgccaacggagcatgtttcaatggatcg
ggttcaggtcgtgagtcggtgaagccaaactattcaccagagcaagcttttccggtggaa
gatggacacaaggtcaaggacttgacaaggaatgcaggtgctttaaaatgttctacctct
tcttctacctgctaa
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