Solanum stenotomum: 125867008
Help
Entry
125867008 CDS
T08385
Name
(RefSeq) endoglucanase 25-like isoform X1
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00500
Starch and sucrose metabolism
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
125867008
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
125867008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_9
Motif
Other DBs
NCBI-GeneID:
125867008
NCBI-ProteinID:
XP_049403376
LinkDB
All DBs
Position
6:45002310..45240177
Genome browser
AA seq
616 aa
AA seq
DB search
MYGRDPWGGALEINATDSATDDDRSRNLQDFDKAALSRNLDETQQSWLLGPTEQKKKKYV
DLGCIIVSRKVFKWTVGCIIAAALIAGFVTLIVKTVPKHRHHNPPPDNYTLALRKALMFF
NAQRSGKLPKHNNVSWRGSSALQDGKSDGSTTFKNLVGGYYDAGDAIKFNFPQSFALTML
SWSVIEYPAKYEAAAELTHVKDIIKWGTDYLLKTFNSSADTIDRVVAQVGIGDTSGGPDP
NDHYCWVRPEDIDYPRPVTECHSCSDLAAEMAAALASASIVFKDNKVYSQKLVHGARTLF
KFAREQRGRYSSGNEASIFYNSTSYWDEFVWGASWLYYATGNTSYLQLATTPGIAKHAGA
FWGGPDYGVFSWDNKLFGAQVLLSRLRLFLSPGYPYEEILSTFHNQTSIVMCSFLPFFTS
FNRTKGGLIELNHGRPQPLQYVVNDAFLATLYSDYLAAADTPGWYCGPHFYSTDVLREFA
QTQIDYILGKNPRKMSYVVGFGNHYPKRVHHRGASVPKNKVKYNCKGGWKWRDSSKPNPN
TLVGAMVAGPDKNDGFHDVRTNYNYTEPTLAGNAGLVAALVALSGDKSVGIDKNTIFSAV
PPMFPTPPPPPAAWKP
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtacgggagggatccatggggtggtgcattagaaattaatgcaacagattctgctact
gatgatgatcggagcagaaacttacaggatttcgataaagcagctttgtcacgaaattta
gatgaaacgcagcaaagttggttgttaggtcctacagagcaaaagaagaagaaatatgta
gatctgggttgtattattgttagtagaaaagtattcaaatggactgtcggttgtattatt
gcagctgcacttattgctggatttgttactcttattgtaaaaactgtacctaagcaccga
caccataatcctccaccagataactacactttagctcttcgtaaagctcttatgttcttc
aatgcacagcgctcggggaaacttcctaagcataataatgtgtcatggagagggagttca
gctctgcaggatgggaaatcggatggttcgactacgtttaagaatttggttgggggttat
tatgatgcaggagatgcgataaagtttaatttccctcaatcttttgctttaactatgttg
agttggagtgtgattgagtatcctgcaaaatatgaagctgctgcagagctcactcatgtc
aaggatattatcaagtgggggactgattatctcttgaaaacattcaattcgtcagctgat
accattgatcgagttgttgcacaagtggggataggggatacttcaggaggaccagatccc
aatgatcactattgttgggtgcgtccagaagacattgattatccacggcctgtaactgaa
tgtcacagttgctcggatcttgctgccgagatggctgctgctctggcttctgcctcgatt
gtatttaaggataacaaggtgtactcacaaaagcttgtccatggtgctagaactttgttc
aagtttgccagggaacagcgtggtagatacagtagcggaaatgaagcttcaattttctac
aattcaactagttattgggatgagtttgtgtggggtgcatcctggctgtattatgctaca
ggaaatacttcatatcttcagcttgctacaactcctggtattgccaaacacgctggtgct
ttctggggaggtcctgattatggcgtgttcagctgggataataagctctttggagcacaa
gtgcttctaagccgtttgagattgttcttgagccctggatatccttatgaagaaattttg
agtacatttcataaccagacaagcatagtcatgtgctccttcttgcccttcttcacttca
tttaatcgaacgaaaggtgggctgatagagttaaaccatggaaggcctcagccacttcag
tatgtagtcaatgatgccttcctggctaccttgtatagtgactatcttgcagctgccgac
acccctggatggtattgtggacctcatttctactccactgatgtcctacgtgaatttgca
cagactcagatcgactatatccttggcaagaaccccaggaaaatgagttatgttgttggc
tttggcaatcactatccaaaacgtgtccaccatcgaggcgcatcagttcctaaaaacaag
gtcaagtataattgtaaaggaggatggaagtggagggattcatctaagcctaatcctaat
actcttgttggagccatggttgctgggccagacaagaatgatggtttccatgatgttcgt
actaattacaattataccgagccaacacttgccggaaatgccggtttggttgcagccctc
gtagctctatctggagataagagtgttggaattgacaagaacacgatattctcagcagta
ccacccatgttccctactccaccacctccgccagctgcctggaaaccataa
DBGET
integrated database retrieval system
