Solanum stenotomum: 125870930
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Entry
125870930 CDS
T08385
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125870930
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125870930
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Peptidase_C24
Kre28
Motif
Other DBs
NCBI-GeneID:
125870930
NCBI-ProteinID:
XP_049407437
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Position
7:complement(9715071..9719111)
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AA seq
439 aa
AA seq
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MAIYWRSYLSLSALLLVMLLVINVTPGYSAEEAEKFQSLKNLTMANSLSEENVPNHEHAV
DDPEKVVSMVDMSIRNSTERRKLGFFSCGTGNPIDDCWRCDRNWQRNRKRLADCAIGFGR
NAIGGRDGKYYVVTDPNDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSF
KTIDGRGVNVHIANGACITVQFVTNIIIHGINIHDCKPTGNAMVRSSPSHFGWRTIADGD
GISIFGSSHIWVDHNSLANCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDSYVRDK
IMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRYLAP
ANPFAKQVTHRVEQSDVWKHWNWRSEGDLMLNGAFFTPSGHGAAASYARASSLAAKASSL
VGTLTSNAGALSCRRGYQC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcaatttattggagatcctatctttctctttctgcattgctacttgtgatgctacta
gtcatcaatgtcactcccggttacagtgctgaagaagcagaaaaattccagagcttaaag
aacttgacaatggcgaatagtttaagtgaagaaaatgtaccaaaccatgaacatgctgta
gatgatccagaaaaggtggtttcaatggtagacatgagcattaggaatagtacagagagg
aggaaattgggttttttctcatgtggaactggaaatcctattgacgattgttggcgttgt
gaccgtaattggcaacgtaaccgcaagcgcctagcagactgtgctattggcttcggacgt
aatgctattggtggccgtgatggcaagtactatgttgtcactgacccaaatgatgacgac
cctgtaaatcccagacctggaacacttcgtcatgctgtaattcaggacagaccgttgtgg
atagtgtttaaacgggatatggttattacacttaaacaagagctaattatgaatagtttc
aagacaattgatggacgtggtgtcaatgttcatattgccaatggggcttgtattactgtc
caatttgttactaatattattatacatggcatcaatattcatgattgtaagccaactggt
aacgccatggtacgtagttcaccgagtcactttggatggaggacaattgctgatggagat
ggcatttccatttttgggtctagccatatttgggttgatcacaactctcttgccaactgt
gctgatggcctaatcgatgctatcatgggatccactgcaattaccatctccaacaattat
tttacacaccataatgaggtgatgttattaggccacagcgactcctatgttagagataag
attatgcaggtgactattgcttacaaccattttggtgagggtctcattcagagaatgcca
aggtgtagacatggttattttcatgtggtgaacaatgactatacacattgggagatgtat
gccattggtggcagcgcttctcctacgattaacagccaaggcaacagatatctcgccccg
gccaacccttttgccaaacaggtgacacatagagtggagcaatcagatgtgtggaagcat
tggaactggagatcagagggagaccttatgcttaatggagccttctttacaccatctgga
catggcgctgcagccagctatgctagggcttcaagcttagcagcaaaggcatcttccctg
gttggcactcttacttcaaatgctggtgcactttcatgtcgcaggggctaccaatgttaa
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