Solanum stenotomum: 125872603
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Entry
125872603 CDS
T08385
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 2
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
sstn
Solanum stenotomum
Pathway
sstn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125872603
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sstn01009
]
125872603
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125872603
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125872603
03041 Spliceosome [BR:
sstn03041
]
125872603
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
125872603
Protein phosphatases and associated proteins [BR:
sstn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
125872603
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125872603
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125872603
Spliceosome [BR:
sstn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125872603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
125872603
NCBI-ProteinID:
XP_049409307
LinkDB
All DBs
Position
8:2635076..2640602
Genome browser
AA seq
310 aa
AA seq
DB search
MAQNGQGIEPAVLDDIINRLLEFRNVRTVRQVQLSEAEIRSLCTAARAIFLQQPNLLELE
APIKICGDIHGQYGDLLRLFEYGGFPPQSNYLFLGDYVDRGKQSLETICLLLAYKIKYPE
NFFLLRGNHECASINRIYGFYDECKRRFNVRLWKVFTDCFNCLPVAALIDDKILCMHGGL
SPDLTDMDLIRNLPRPTDVPDSGLLCDLLWSDPSREVKGWGMNDRGVSYTFGPDKVAEFL
MQQDMDLVCRAHQVVEDGYEFFAERQLVTVFSAPNYCGEFDNAGAMMSVDENLMCSFQIL
KPADRKPRFL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaaatgggcaggggatagaacctgcggttcttgatgacataattaacaggcta
ttggagtttaggaatgtaagaactgttagacaggttcagctttcagaggctgagattcgt
tctctctgtactgctgcaagagcaatctttcttcagcagcccaatctcttggagcttgaa
gcccctatcaagatctgtggtgatattcatggacagtatggtgatcttctgaggcttttt
gaatatggtggattcccaccccagtctaattacttgtttttaggggactatgtggatcgt
ggcaaacagagtttggagactatatgccttctacttgcttacaaaattaaatacccagag
aacttctttctgttaagagggaatcatgagtgtgcttctattaaccggatatacggattt
tatgatgaatgtaagcgccgattcaatgtgaggctgtggaaagtcttcactgattgtttc
aactgtcttcccgtggcagctctcatagatgataaaatactttgcatgcatggtggcctt
tctcctgatctaacagacatggatctgatacgaaatttaccgcgtccaacagatgttccc
gattctggtttgctttgtgatttactttggtcagatcctagtagagaagttaaaggttgg
ggaatgaatgacaggggcgtctcatatacctttggtcctgataaagtggcagagttcttg
atgcaacaagatatggaccttgtttgtcgtgcccatcaggttgtggaggacggttatgaa
ttttttgctgaaaggcagctagttacagtattttctgcaccaaactactgtggcgaattt
gataatgctggtgcaatgatgagtgtggatgaaaatctgatgtgctctttccagattttg
aagccagcagatagaaaacctcggttcttgtga
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