KEGG   Solanum stenotomum: 125874880
Entry
125874880         CDS       T08385                                 
Name
(RefSeq) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
sstn  Solanum stenotomum
Pathway
sstn03018  RNA degradation
sstn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125874880
  09123 Folding, sorting and degradation
   03018 RNA degradation
    125874880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sstn03019]
    125874880
   03041 Spliceosome [BR:sstn03041]
    125874880
Messenger RNA biogenesis [BR:sstn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     125874880
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     125874880
Spliceosome [BR:sstn03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    125874880
 Complex C
  U2 snRNP components
    125874880
SSDB
Motif
Pfam: LSM SM-ATX DUF150_C
Other DBs
NCBI-GeneID: 125874880
NCBI-ProteinID: XP_049411882
LinkDB
Position
8:301630..305528
AA seq 93 aa
MLFFSYFKDMVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTSVVDEDKYPHMRSVRNC
FIRGSVVRYVQLPPDGVDIELLHDATRREARGG
NT seq 282 nt   +upstreamnt  +downstreamnt
atgttgtttttctcatacttcaaggacatggtgggcagagaagtgacagtggaactgaag
aatgatttggctatccgaggcacactccattcagtcgatcagtatctcaacattaagctc
gaaaacacaagtgtcgttgatgaagacaagtaccctcacatgcgttcggtgaggaactgc
ttcatcagaggatcagtggtgagatacgtccagttacctccagatggagtcgacatagag
cttcttcatgatgctacgaggagagaagctcgtggtggctaa

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