Serratia surfactantfaciens: ATE40_010210
Help
Entry
ATE40_010210 CDS
T06779
Name
(GenBank) transcriptional regulator
KO
K03746
DNA-binding protein H-NS
Organism
ssur
Serratia surfactantfaciens
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssur03036
]
ATE40_010210
03400 DNA repair and recombination proteins [BR:
ssur03400
]
ATE40_010210
Chromosome and associated proteins [BR:
ssur03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
ATE40_010210
DNA repair and recombination proteins [BR:
ssur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ATE40_010210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF3037
DUF6626
PaaX_C
DUF6280
TetR_C_24
MscS_porin
DUF3502
BST2
Motif
Other DBs
NCBI-ProteinID:
AOE99603
LinkDB
All DBs
Position
2173549..2173956
Genome browser
AA seq
135 aa
AA seq
DB search
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEDSQAQAEIEERTRKLQQ
YREMLIADGIDPNELLQTMAANKAAGKAKRAARPAKYQYKDENGELKTWTGQGRTPAVIK
KAIEEQGKSLDDFLL
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcattaaagattttgaacaacatccgcactctgcgcgcccaggcaagagaa
tgcacgctggaaacgctggaagaaatgctcgagaaactggaagttgttgtgaacgaacgt
cgcgaagaagacagccaggctcaagcagaaatcgaagaacgcactcgtaaactgcagcaa
taccgcgaaatgctgattgctgacggtatcgacccgaatgaactgctgcaaactatggct
gccaacaaggctgctggtaaagcaaaacgcgcagcacgcccggctaaataccaatataaa
gacgaaaacggcgaactgaaaacctggaccggtcaaggccgtactcctgcggtgatcaag
aaagctatcgaagagcaaggtaaatctctggacgatttcctgctgtaa
DBGET
integrated database retrieval system
