Streptococcus suis TL13 (serotype 16): TL13_0002
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Entry
TL13_0002 CDS
T02672
Symbol
dnaN
Name
(GenBank) DNA polymerase III beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
ssut
Streptococcus suis TL13 (serotype 16)
Pathway
ssut03030
DNA replication
ssut03430
Mismatch repair
ssut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TL13_0002 (dnaN)
03430 Mismatch repair
TL13_0002 (dnaN)
03440 Homologous recombination
TL13_0002 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssut03032
]
TL13_0002 (dnaN)
03400 DNA repair and recombination proteins [BR:
ssut03400
]
TL13_0002 (dnaN)
Enzymes [BR:
ssut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TL13_0002 (dnaN)
DNA replication proteins [BR:
ssut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TL13_0002 (dnaN)
DNA repair and recombination proteins [BR:
ssut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TL13_0002 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AGL46989
LinkDB
All DBs
Position
1528..2664
Genome browser
AA seq
378 aa
AA seq
DB search
MIQFSINKNIFLQALSITKRAISTKNAIPILSTVKITVTSEGITLTGSNGQISIEHFISI
QDENAGLLISSPGSILLEAGFFINVVSSMPDLVLDFNEIEQKQIVLTSGKSEITLKGKEA
EQYPRLQEVPTSKPLVLETKVLKQTINETAFAASTQESRPILTGVHFVLTENKNLKTVAT
DSHRMSQRKLVLDTSGDDFNVVIPSRSLREFTAVFTDDIETVEVFFSNNQILFRSEHISF
YTRLLEGTYPDTDRLIPTEFKTTAIFDTANLRHSMERARLLSNATQNGTVKLEIANNVVS
AHVNSPEVGRVNEELDTVEVSGEDLVISFNPTYLIEALKATTSEQVKISFISSVRPFTLI
PNNEGEDFIQLVTPVRTN
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgattcaattttctattaataaaaatatatttctacaagcacttagtattactaaacgg
gcaatcagtacaaaaaatgctattccaattctttcaacagtaaaaattacagtaactagt
gaagggatcactttaactggttcaaatggacaaatctcgattgaacattttatttctatt
caagatgaaaatgcaggacttttgatcagttctccaggttccattctcttagaagctggt
ttctttattaatgtcgtatccagcatgccggatttagtccttgacttcaatgaaattgaa
caaaaacaaatcgttttgacaagtggtaagtctgaaatcacattaaagggaaaagaagca
gaacagtatcctcgtttacaggaagttccaacttcaaaaccattggtgttagaaaccaaa
gtattaaaacaaacaattaatgaaacagcatttgcagcttctacacaagaaagtcgtcct
attcttacgggtgttcattttgttttaacagaaaataaaaatctaaaaactgttgcaaca
gattcacaccgtatgagccaacggaaattggtccttgatacatctggtgatgattttaat
gttgtcattccaagtcgttctctccgtgaatttactgcagtttttacagatgatattgaa
acagtagaagtcttcttttcaaataatcaaatcctttttagaagcgagcatattagcttc
tatacacgcttattagaaggtacctaccctgatacagaccgcttaattccaactgagttt
aaaacaactgcaatttttgatactgcaaatcttcgtcactcgatggagcgtgctcgtctt
ctttcaaatgcaacccaaaatggtacagtaaaactagaaattgctaataatgttgtatcg
gctcatgtaaattctccagaagttggacgtgtgaatgaggaattagatactgtagaagta
tcaggtgaagacttagtaatcagctttaacccaacttacttgatagaagcattgaaagcc
acaactagtgaacaagtgaaaattagctttatctcttctgtccgtccatttacattgatt
ccaaataatgaaggggaagattttattcaattggttacaccagttcgtaccaactaa
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