Sphingobium sp. SYK-6: SLG_03780
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Entry
SLG_03780 CDS
T01622
Name
(GenBank) efflux pump outer membrane protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy01501
beta-Lactam resistance
ssy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SLG_03780
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SLG_03780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssy02000
]
SLG_03780
01504 Antimicrobial resistance genes [BR:
ssy01504
]
SLG_03780
Transporters [BR:
ssy02000
]
Other transporters
Pores ion channels [TC:
1
]
SLG_03780
Antimicrobial resistance genes [BR:
ssy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SLG_03780
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
SLG_03780
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
SLG_03780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
BAK65053
LinkDB
All DBs
Position
complement(384846..386234)
Genome browser
AA seq
462 aa
AA seq
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MRRALPLAACLLAGCSLAPAYERPAAPVQAQWPGDAAALADQAGLPAADYRTLFRDPRLI
ALIDIALENNRDLRQAAANVARARAQFRIQRADLFPQLDAGADVVRGNQAGGETRTTATA
DLSVTAYEIDLFGRIRSLTDAARENYLATAADAQAVRLALIGDIAQAWLTHAADASLLEI
SRLTAETAQRTEALTQARLASGIAPRSDLRQAQTILATAQSDMARYTTAIAQDRNLLALL
VGAPVDPALLPGGIEEAGETIDAPLPGTSSEVLLRRPDIMAAEHDLRAANAQIGAARAAL
FPRVTLGALFGLVGSSLDGLFGSGGTQLQQGAAGITWPIFQGGAARAGVAASQAQRDALL
AAYEKAIQTAYREVADALARQATIDDQLGADRLRVQASEDAAYLVDARYRGGIDSFLAAL
DAQRSLYTARRTLVASLLEAAGNRVTLYRALGGEMMPAPPAP
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcgccctgccactggcggcctgcctgctcgccggctgctcgctcgccccggcc
tatgagcgcccggcggcgccggtgcaggcgcaatggcccggggacgcggccgcgctggcg
gatcaggccggccttcccgccgccgattaccgcacgctgttccgcgatccgcggctgatc
gcgctgatcgacatcgccctggagaataatcgcgatctgcggcaggccgccgccaatgtc
gcccgggcccgcgcccagttccgcatccagcgcgccgatctcttcccgcagctcgatgcg
ggcgccgatgtggtgcgcggcaaccaggccggcggcgagacgcggacgaccgccaccgcc
gatctgtcggtcaccgcttatgagatcgatctgttcgggcgcatccgctcgctcaccgat
gccgcgcgcgaaaactatctcgcgacggcggcggacgcgcaggcggtgcggctcgcgctg
atcggcgacatcgcgcaggcatggctcacccatgcggccgatgcgagcctgctggagatc
agccggctgacggcggagacggcgcagcggaccgaagcgctcacgcaggcgcggctcgcg
agcggcatcgcgccgcgcagcgacctgcggcaggcgcagaccatcctcgccacggcccag
tccgacatggcgcggtacacgaccgcgatcgcgcaggaccgcaatctccttgccctgctc
gtgggcgccccggtcgatcctgccctgctgcccggcggcatcgaggaagcgggcgagacg
atcgacgcgcctttgcccggcacgagcagcgaagtgctgctgcgccgtccggacatcatg
gccgccgagcatgacctgcgcgccgccaatgcgcagatcggcgcggcccgcgcggcgctg
ttcccgcgcgtgacgctcggcgcgctgttcggcctcgtcggctcctcgctggatggcctg
ttcggcagcggcggcacgcagcttcagcagggggcggccgggatcacatggccgatcttc
cagggcggcgcggcgcgcgcgggcgtcgccgccagccaggcccagcgggatgcactgctc
gcggcttatgagaaggcgatccagaccgcctatcgggaagtggccgacgcgctggcgcgg
caggcgaccatcgacgaccagctcggcgcggaccggctgcgcgtgcaggccagcgaggat
gccgcctatctggtcgacgcgcgctatcgcggcggcatcgacagcttcctcgccgcgctc
gatgcccagcgcagcctctacactgcccggcgcacgctcgtcgcctcgctgctggaagcg
gccggcaaccgcgtcacgctctaccgcgcgctgggcggggaaatgatgccggcacccccg
gcgccctga
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