Saccharothrix syringae: EKG83_34665
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Entry
EKG83_34665 CDS
T06258
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ssyi
Saccharothrix syringae
Pathway
ssyi00040
Pentose and glucuronate interconversions
ssyi01100
Metabolic pathways
ssyi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EKG83_34665
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EKG83_34665
Enzymes [BR:
ssyi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
EKG83_34665
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
QFZ21865
UniProt:
A0A5Q0H7J1
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All DBs
Position
8388547..8389674
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AA seq
375 aa
AA seq
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MVLTSPSPRPPSSEHRRTRSPTTYRRRRRRPRPTEDFVRRTPAFALAATLIGGVTAAVTA
PVAAAPVAAAADSPVGFASVNALGQNGTTGGAGGPEVTVTNADDFIANIKAAGPRVVRVQ
GLITLPAGMYDVSSDKTITGVGASSGITGGGLNVGLPVSGATTPPADAVHNVIIRNMVFR
NASDDSINVQMFSHHVWIDHNDLASGYDGLIDIKRGSSYVTVSWNHTHHHTKNMLLGHDD
KNGAQDTGYLKVTYHHNWFDKTPQRNPRVRFGNPVHVFNNYYFDNSDTGVACQARSGCWV
EGNYFEDVEEPMTNSYSGPRGNIVERNNVYVGESGSPDIGGSSGVEDPARYYQYTVDGPG
DVKTLVTRGAGTGRI
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
attgttttgacttccccgtccccccgccccccatcatcggaacaccgccgcacgcgttcc
ccgaccacgtaccgccgacgccggcgtcggccacgtccaacggaggacttcgtgaggaga
acacctgcgttcgcgctcgccgcgacgctcatcggcggggtcaccgccgcggtcaccgcg
cccgtcgcggccgcgcccgtcgcggccgcggccgactcgcccgtcggcttcgcctcggtc
aacgccctcggccagaacggcaccaccggcggcgcgggcggccccgaggtcaccgtcacc
aacgccgacgacttcatcgccaacatcaaggccgccggcccgcgcgtggtccgcgtccag
ggcctgatcacgctgcccgccggcatgtacgacgtgtcgtccgacaagacgatcaccggc
gtgggcgcgtcctcgggcatcaccggcggcggcctgaacgtcggcctgccggtcagcggc
gccaccacgccgccggcggacgccgtgcacaacgtgatcatccgcaacatggtgttccgc
aacgccagcgacgactcgatcaacgtgcagatgttcagccaccacgtctggatcgaccac
aacgacctggcctccggctacgacggcctgatcgacatcaagcgcgggtcgagctacgtc
accgtgtcgtggaaccacacccaccaccacaccaagaacatgctcctcgggcacgacgac
aagaacggcgcccaggacaccgggtacctgaaggtcacctaccaccacaactggttcgac
aagacgccgcagcgcaacccgcgcgtgcggttcggcaacccggtgcacgtgttcaacaac
tactacttcgacaacagcgacacgggcgtggcgtgccaggcccggtccgggtgctgggtc
gagggcaactacttcgaggacgtcgaggagcccatgaccaacagctactcggggcccagg
gggaacatcgtcgagcggaacaacgtgtacgtgggcgagtccggttcgcccgacatcggc
gggtccagcggggtcgaggacccggcgcggtactaccagtacacagtggacggtccgggc
gacgtgaaaaccctggtgacacgaggagccggtacgggcaggatttga
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