Symphalangus syndactylus (siamang): 129468343
Help
Entry
129468343 CDS
T10134
Symbol
TNPO1
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129468343 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssyn03019
]
129468343 (TNPO1)
03009 Ribosome biogenesis [BR:
ssyn03009
]
129468343 (TNPO1)
Messenger RNA biogenesis [BR:
ssyn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
129468343 (TNPO1)
Ribosome biogenesis [BR:
ssyn03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
129468343 (TNPO1)
Pre-60S particles
129468343 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
Vac14_Fab1_bd
TOR1L1_N
IBN_N
Cnd1
TPR_IPO5
HEAT_EF3_N
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
MMS19_C
CEP104-like_TOG
HEAT_GCN1_C
Ltn1_1st
HEAT_Maestro
HEAT_GCN1_C_2
INTS7_N
UNC45-central
TPR_TTI1_C
Dopey_N
RTP1_C1
VPS15-like_hel
DUF3689
Motif
Other DBs
NCBI-GeneID:
129468343
NCBI-ProteinID:
XP_055109746
LinkDB
All DBs
Position
18:complement(28552561..28701576)
Genome browser
AA seq
898 aa
AA seq
DB search
MVWDRQTKMEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIF
VLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGI
LITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPL
NIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVR
KNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDV
LVRHLPKLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDED
GIEEEDDDDDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWV
VKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQ
PPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSK
YQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSS
VATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLA
EGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPI
LGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTA
ITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDF
IFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAFYGV
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgggaccggcaaaccaagatggagtatgagtggaaacctgacgagcaagggctt
cagcaaatcctgcagctgttgaaggaatcccagtccccagacaccaccatccagagaacc
gtgcaacaaaaactggaacaacttaatcaatatccagactttaacaactacttgattttt
gttcttacaaaattaaagtctgaagatgaacccacaagatcattgagtggtctcatcttg
aagaataatgtgaaagcacactttcagaacttcccaaatggtgtaacagactttattaaa
agtgaatgtttaaataatattggtgactcctctcctctgattagagccactgttggtatt
ttgatcacaactatagcctccaagggagaattgcagaattggcctgacctcttaccaaaa
ctctgtagcctgttggattctgaagattataatacctgtgagggagcatttggtgccctt
cagaagatttgtgaagattctgctgagattttagatagtgatgttttagatcgtcctctc
aacatcatgattcccaaatttttacagttcttcaagcatagtagtccaaaaataaggtct
cacgctgttgcgtgtgtcaatcagtttatcatcagtaggactcaagctctgatgttgcac
attgattcttttattgagaatctctttgcattagctggtgatgaagaaccagaggtacgg
aaaaatgtgtgccgagcacttgtgatgttgctcgaagttcgaatggatcgcctgcttcct
cacatgcataatatagttgagtacatgctacagaggactcaagatcaagatgaaaatgtg
gctttagaagcctgtgaattttggctaactttagctgaacagccaatatgcaaagatgtg
cttgtaaggcatcttcctaagttgattcctgtgttagtgaatggcatgaagtactcagat
atagatattatcctacttaagggtgatgttgaagaagacgaaacgattcctgatagtgaa
caggatatacggccacgttttcaccgatcaaggacggtggctcagcagcatgatgaagat
ggaattgaagaggaagatgatgatgatgatgaaattgatgatgatgatacaatttctgac
tggaatctaagaaaatgttctgctgctgccctagatgttcttgcaaatgtgtatcgtgat
gaactgctgccacatattttgccccttttgaaagaattgctttttcatcatgaatgggtt
gttaaagaatcaggcattttggttttaggagcaattgctgaaggttgcatgcagggcatg
attccatacttgcctgagcttattcctcaccttattcagtgcctctctgataaaaaggct
cttgtgcgttccataacctgctggactcttagccgctatgcacactgggtagtcagccag
ccaccagacacgtacctgaagccattaatgacagaattgctaaagcgcatcctggatagc
aacaagagagtacaagaagctgcctgcagtgcctttgctaccctagaagaggaggcttgt
acagaacttgttccttaccttgcttatatacttgataccctggtctttgcatttagtaaa
taccagcataagaacctgctcattctttacgatgccataggaacattagcagattcagta
ggacatcatttaaacaaaccagaatatattcagatgctaatgcctccactgatccagaaa
tggaacatgttaaaggatgaagataaagatctcttccctttacttgagtgcctatcttca
gttgccacagcactgcagtctggcttccttccatactgtgaacctgtgtatcagcgttgt
gtaaacctagtacagaagactcttgcacaagccatgctaaacaatgcccaaccagatcaa
tatgaagctccagataaagattttatgatagtggctcttgatttactgagtggcctggct
gaaggacttggaggcaacattgaacagctggtagcccgaagtaacatcctaacactaatg
tatcagtgcatgcaggataaaatgccagaagttcgacagagttcttttgccctgttaggt
gacctcacaaaagcttgctttcagcatgttaagccttgtatagctgatttcatgccaata
ttgggaaccaacctaaatccagaattcatttcagtctgcaacaatgccacatgggcaatt
ggagaaatctccattcaaatgggtatagagatgcagccttatattcctatggtgttgcac
cagcttgtagaaatcattaacagacccaacacaccaaagacgttgttagagaatacagca
ataacaattggtcgtcttggttacgtttgtcctcaagaggtggcccccatgctacagcag
tttataagaccctggtgcacctctctgagaaacataagagacaatgaggaaaaggattca
gcattccgtggaatttgtaccatgatcagtgtgaatcccagtggcgtaatccaagatttt
atatttttttgtgatgccgttgcatcatggattaatccaaaagatgatctcagagacatg
ttctgtaagatccttcatggatttaaaaatcaagttggtgatgaaaattggaggcgtttc
tctgaccagtttcctcttcccttaaaagagcgtcttgcagctttttatggtgtttaa
DBGET
integrated database retrieval system
