Symphalangus syndactylus (siamang): 129468991
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Entry
129468991 CDS
T10134
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain isoform X2
KO
K08131
collagen type IX alpha
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04151
PI3K-Akt signaling pathway
ssyn04510
Focal adhesion
ssyn04512
ECM-receptor interaction
ssyn04820
Cytoskeleton in muscle cells
ssyn04974
Protein digestion and absorption
ssyn05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
129468991 (COL9A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129468991 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129468991 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129468991 (COL9A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
129468991 (COL9A2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
129468991 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssyn00535
]
129468991 (COL9A2)
Proteoglycans [BR:
ssyn00535
]
Extracellular matrix (ECM) proteoglycans
Others
129468991 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
129468991
NCBI-ProteinID:
XP_055111040
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Position
19:137321384..137338391
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AA seq
692 aa
AA seq
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MAAAAASPRSLLVLLQVLVLALAQIRGPPGERGPPGPPGPPGPPGVPGSDGIDGDKGPPG
KAGPPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGF
AGPPGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTN
CPAGMKGPPGLQGVKGHAGKRGVLGDPGRQGKPGPKGDVGASGEQGIPGPPGPQGIRGYP
GMAGPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDVGSPGIRGPQGITGPK
GATGPPGINGKDGTPGTPGMKGSAGQAGRPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQ
GLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIP
GPQGLPGVKGDKGSPGKTGPRGGVGDRGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYP
GPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVAGRDATDQHIVDVALKMLQEQL
AEVAVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPK
GKRGEKGDPGEVGRGHPGMPGPPGIPGLPGQPGQAINGKDGDRGSPGAPGEAGRPGLPGP
VGLPGFCEPAACLGASAYASARLTEPGSIKGP
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgctgcggcctcaccccgcagcctccttgttctcctccaggtgctagtgctc
gctctggcgcagatcagaggtccaccgggagagcggggccccccggggcccccgggaccg
ccgggaccgccgggagtgcctggatccgacggcatcgacggtgacaaggggccccctgga
aaagctggccctccgggacccaagggtgagcctggcaaagccgggccagatgggccagac
gggaagcccgggattgatggtttaactggagccaagggggagcctggccccatggggatc
cctggagtcaagggccagcccggtcttcctggtcctcctggccttccgggccctggtttt
gctggacctcctgggccgcctggacctgtcggcctccctggtgagattggaatccgaggc
cccaagggggaccctggaccagatggaccatcggggcccccaggaccccctgggaaacct
ggtcgcccaggaaccatccagggtctggaaggcagtgcggatttcctgtgtccaaccaac
tgtccagccgggatgaaaggtcccccaggtctgcagggagtgaaggggcatgcgggcaaa
cgcggggttctgggtgatcctggccgccaggggaagccgggtcccaagggagatgtgggt
gcctctggagagcaaggcatccctggaccaccgggtccccagggcatcaggggctacccg
ggcatggcagggcccaagggagagacgggccctcatggatataaaggcatggtgggcgcc
atcggtgccactgggccaccgggtgaggaaggtcctaggggaccgccaggccgagctggg
gagaagggtgacgtgggcagcccaggtattcgtggaccccaggggatcacaggcccgaaa
ggagcaacgggccccccaggcatcaacggcaaggacgggaccccaggcacgcctggcatg
aagggcagtgcaggacaagcgggacggccaggaagtccaggccaccagggcctagcgggt
gtgccaggccagcctgggacaaaaggaggccctggagaccagggtgagccgggcccacag
ggccttcctggattctctggtccccctgggaaagagggagagccagggcctcgaggagaa
attggtccccagggcatcatgggacagaagggtgaccaaggcgagaggggtccagtgggg
cagccaggccctcagggaaggcagggccctaagggagagcagggcccccctggaattcca
gggccccaaggcttgccaggcgtcaaaggagacaagggctccccagggaagaccgggcct
cgaggcggagtgggtgaccggggggtggccggcctccccggagagaaaggcgagaagggc
gagtccggcgagcctgggcccaagggacagcaaggagtacgtggagaacccggctaccct
ggccccagcggggatgcgggcgccccaggggttcagggctaccctggtcccccgggccct
cgaggactggccgggaaccgaggcgtgccaggacagcccgggagacagggcgtggcgggc
cgggatgccactgaccagcacatcgtggatgtggcgctgaagatgctgcaagagcaactg
gcagaggtcgctgtgagtgccaagcgggaagccctgggtgcggtgggcatgatgggtccc
ccaggacctcctgggccccctgggtacccaggcaagcagggaccccatgggcaccctggc
cctcggggcgttcctggcatcgtgggagccgtgggtcagatcggcaacacggggcccaag
ggaaaacgtggagagaagggtgatccaggagaagtgggacggggacaccccgggatgcct
gggcccccagggatcccaggactccctggccagcctggccaggcaatcaatggcaaggat
ggagatcgagggtccccaggggctccaggagaggcaggtcgacctggccttccaggcccc
gtggggctgccgggcttctgtgaacctgcagcctgccttggagcttcggcctatgcctct
gcccgccttacagagcccggatccatcaaggggccttga
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