Symphalangus syndactylus (siamang): 129471649
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Entry
129471649 CDS
T10134
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog isoform X2
KO
K14004
protein transport protein SEC13
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03013
Nucleocytoplasmic transport
ssyn04141
Protein processing in endoplasmic reticulum
ssyn04150
mTOR signaling pathway
ssyn05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129471649 (SEC13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129471649 (SEC13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
129471649 (SEC13)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129471649 (SEC13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssyn03019
]
129471649 (SEC13)
04131 Membrane trafficking [BR:
ssyn04131
]
129471649 (SEC13)
Messenger RNA biogenesis [BR:
ssyn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129471649 (SEC13)
Membrane trafficking [BR:
ssyn04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
129471649 (SEC13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
129471649 (SEC13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
129471649 (SEC13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_RIG_2nd
ANAPC4_WD40
EIF3I
WD40_Gbeta
Beta-prop_Vps41
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
129471649
NCBI-ProteinID:
XP_055116539
LinkDB
All DBs
Position
21:58174073..58194355
Genome browser
AA seq
322 aa
AA seq
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MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPSYIK
RFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI
SDVNKGQGSVSASVTEGQQNEQ
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcagtaattaacactgtggatacctcccatgaggacatgattcatgacgcccag
atggactactatggcacccgcctggcaacctgctcatcagacaggtctgtcaaaatcttt
gatgtgcgcaatggagggcagatccttatcgccgacctcaggggtcatgagggtcctgtg
tggcaagtggcctgggctcaccccatgtatggcaacatcctggcatcgtgctcctatgac
cggaaagtcattatctggagagaggaaaacggcacctgggagaagagccacgagcatgca
ggacacgactcctcagtgaactcggtgtgctgggccccccatgactacggcctgatcctg
gcctgtgggagctcagatggggccatctccttgctgacttacaccggggaaggccaatgg
gaagtaaagaagatcaacaacgctcacaccattggctgcaatgccgtcagctgggcccct
gctgttgtacctggaagcctcatagaccagccatcggggcagaaacccagttatatcaag
aggtttgcatcaggtggctgtgacaacctcatcaagctgtggaaggaggaggaggacggc
cagtggaaggaggagcagaagctagaagcgcacagtgactgggttcgagatgtggcctgg
gccccctccattggcctgcccaccagcaccatcgccagctgctcccaggacggtcgtgtg
ttcatttggacctgtgatgatgcctcaagcaatacgtggtcccctaaattgttgcacaag
ttcaatgatgtggtgtggcatgtgagctggtccatcacagccaacatcctggctgtctcc
ggtggagacaataaggtgaccctgtggaaggagtcggttgacgggcagtgggtgtgcatc
agtgatgtcaacaagggccagggctccgtatcagcgtcagtcacagagggccagcagaac
gagcagtga
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integrated database retrieval system