KEGG   Symphalangus syndactylus (siamang): 129471649
Entry
129471649         CDS       T10134                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog isoform X2
  KO
K14004  protein transport protein SEC13
Organism
ssyn  Symphalangus syndactylus (siamang)
Pathway
ssyn03013  Nucleocytoplasmic transport
ssyn04141  Protein processing in endoplasmic reticulum
ssyn04150  mTOR signaling pathway
ssyn05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:ssyn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    129471649 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    129471649 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    129471649 (SEC13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    129471649 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssyn03019]
    129471649 (SEC13)
   04131 Membrane trafficking [BR:ssyn04131]
    129471649 (SEC13)
Messenger RNA biogenesis [BR:ssyn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     129471649 (SEC13)
Membrane trafficking [BR:ssyn04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    129471649 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    129471649 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    129471649 (SEC13)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_RIG_2nd ANAPC4_WD40 EIF3I WD40_Gbeta Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st NBCH_WD40
Other DBs
NCBI-GeneID: 129471649
NCBI-ProteinID: XP_055116539
LinkDB
Position
21:58174073..58194355
AA seq 322 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPSYIK
RFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI
SDVNKGQGSVSASVTEGQQNEQ
NT seq 969 nt   +upstreamnt  +downstreamnt
atggtgtcagtaattaacactgtggatacctcccatgaggacatgattcatgacgcccag
atggactactatggcacccgcctggcaacctgctcatcagacaggtctgtcaaaatcttt
gatgtgcgcaatggagggcagatccttatcgccgacctcaggggtcatgagggtcctgtg
tggcaagtggcctgggctcaccccatgtatggcaacatcctggcatcgtgctcctatgac
cggaaagtcattatctggagagaggaaaacggcacctgggagaagagccacgagcatgca
ggacacgactcctcagtgaactcggtgtgctgggccccccatgactacggcctgatcctg
gcctgtgggagctcagatggggccatctccttgctgacttacaccggggaaggccaatgg
gaagtaaagaagatcaacaacgctcacaccattggctgcaatgccgtcagctgggcccct
gctgttgtacctggaagcctcatagaccagccatcggggcagaaacccagttatatcaag
aggtttgcatcaggtggctgtgacaacctcatcaagctgtggaaggaggaggaggacggc
cagtggaaggaggagcagaagctagaagcgcacagtgactgggttcgagatgtggcctgg
gccccctccattggcctgcccaccagcaccatcgccagctgctcccaggacggtcgtgtg
ttcatttggacctgtgatgatgcctcaagcaatacgtggtcccctaaattgttgcacaag
ttcaatgatgtggtgtggcatgtgagctggtccatcacagccaacatcctggctgtctcc
ggtggagacaataaggtgaccctgtggaaggagtcggttgacgggcagtgggtgtgcatc
agtgatgtcaacaagggccagggctccgtatcagcgtcagtcacagagggccagcagaac
gagcagtga

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