Symphalangus syndactylus (siamang): 129490283
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Entry
129490283 CDS
T10134
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssyn04121
]
129490283 (TOPORS)
03036 Chromosome and associated proteins [BR:
ssyn03036
]
129490283 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssyn03037
]
129490283 (TOPORS)
Enzymes [BR:
ssyn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129490283 (TOPORS)
Ubiquitin system [BR:
ssyn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129490283 (TOPORS)
UBL E3 ligases
129490283 (TOPORS)
Chromosome and associated proteins [BR:
ssyn03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
129490283 (TOPORS)
Cilium and associated proteins [BR:
ssyn03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
129490283 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI_Topors
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
Rad50_zn_hook
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
129490283
NCBI-ProteinID:
XP_055149989
LinkDB
All DBs
Position
9:111941585..111953594
Genome browser
AA seq
1045 aa
AA seq
DB search
MGSQPPLGSPLSREEGEAPPPVPASEGRRRSRRVRLRGSCRHRPSFLGCRELAASALARP
APASSEIMASAAKEFKMDNFSPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRCL
HKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFVTPDRRFRY
RTTLTRERNASVYSPSGPVNRRTTTPPDSGVLFEGLGISTRPRDVEIPQFMRQIAVRRPT
TADERSLRKIQEQDIINFRRTLYRAGARVRNIEDGGRYRDISAEFFRRNPACLHRLVPWL
KRELTVLFGAHGSLVNIVQHIIMSNVTRYDLESQAFVSDLRPFLLNRTEHFIHEFISFAR
SPFNMAAFDQHANYDCPAPSYEEGSHSDSSVITISPDEAETQELDINVATVSQAPWDDET
PGPSYSSSEQVHVTMSSLLNTSDSSDEELVTGGATSQIQGVQTNEDLNNDSDDSSDNCVI
VGFVKPLAERTPELVELSSDSEDLGSYEKMETVKTQEQEQSYSSGDSDVSRCSSPHSVLG
KDEQINKGHCDSSTRIKSKKEEKRSTSLSSPRNLSSSVRGDRVYSPYNHRHRKRGRSRSS
DSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRSQTL
SLSSESTSRSRSRSSDHGKRRSRSRNRDRYYLRNNYGSRYKWEYTYYSRNKDRDGYESSY
RRRTLSRAHYSRQSSSPEVRVQSFSERTNARKKNNHSERKYYYYERHRSRSLSSNRSRTA
STGTDRVRNEKPGGKRKYKTRHLEGTNEVAQPSREFASKAKDSHYQKSSSKLDGNYKNES
DTFSDSRSSDRETKHKRRKRKTRSLSVEIVYEGKATDTTKHHKKKKKKHKKKHKKHHGDN
ASRSPVVITIDSDSDKDSEVKEDTECDHSGPQDPLPSEFLAPSLEPFETKDVVTIEDEFG
VLDKECDIATLTNNLNNANKTVDNIPPLAASVEQTLDVREDSTFVSDLQNQPTNIVSIQT
EPSRQLPSPRTSLMSVCLGRDCDMS
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgcagccgccgctggggtctccgctgtctcgcgaggagggtgaagcgcccccg
cctgttcccgcttcggagggtaggcggagaagtcgccgggtacgccttcgcggatcctgc
cgtcaccgacctagctttctgggctgccgggagctcgcggcgagcgccctagccaggcct
gcgccggcatcctccgagataatggcatcagctgctaaggaatttaaaatggacaacttt
tcacctaaagctggcactagcaaattgcaacagacagtaccagctgatgcgtctcctgat
tctaagtgtcccatatgcttggatagatttgataatgtgtcttacttagatcgctgctta
cataagttctgttttcgctgtgtacaggagtggtcaaaaaacaaagctgaatgcccacta
tgtaaacagccctttgattctattttccattctgtgagggcagaagatgacttcaaggag
tatgtcctaaggccttcgtataatggttcttttgtcacccctgatcgacgatttcgctac
cgtacaactctgacaagggaacgaaatgcttctgtttattcacctagtggtcctgtgaac
agaagaacaacaactccaccagatagtggagtactatttgaagggttaggcatttcaaca
agacctagagatgttgaaattcctcaatttatgagacaaattgcagtaaggaggccaact
accgcagatgaaagatctttgcggaaaattcaagaacaagatattattaattttagacga
actctctatcgtgctggtgctcgagttagaaatattgaagatggtggccgctacagggat
atttccgctgaatttttccgtagaaatccagcttgccttcacagattagtcccctggtta
aaacgtgaacttacagttctttttggagctcatggatctttagtgaatattgtccagcat
attatcatgagtaatgttactcgctatgacttggagagtcaggcatttgtgtctgattta
agaccatttttacttaatcgaactgagcattttatacatgaatttatcagttttgcccga
tctccttttaacatggcagcctttgaccagcatgccaattatgattgccctgctccttca
tatgaagaaggcagccattctgattcttcagtcataacaatatctccagatgaggctgag
acccaagaactggatattaatgtagccactgttagtcaggcaccatgggatgatgaaact
ccaggaccatcttactcaagctcagagcaggtacacgttactatgtcttctcttttaaat
acttctgacagttcagatgaagaacttgtcacaggaggagccacgtctcagatacaagga
gtacaaaccaatgaggacctaaataatgacagtgatgattcttcagataattgtgtcatt
gttgggtttgttaaaccactagctgagaggaccccagaacttgttgaactgtcctctgat
tctgaggacttaggttcttatgagaaaatggagacagtgaagacacaagaacaagagcaa
tcttacagttctggtgatagcgatgttagtagatgctcatctccacactctgtccttgga
aaggatgaacaaataaataaaggtcattgtgattctagtacaagaatcaaatcaaagaag
gaagagaaacgatctacatcattgtcatctcccagaaacctaagctcatctgtaagagga
gacagagtatattctccatataaccatagacacagaaagaggggaagatcaagaagttca
gattcacgttctcagagtagaagtgggcatgatcagaagaatcatagaaagcatcatggg
aagaaaaggatgaaaagtaaacgatccagaagcagggaaagtagcagacctagagggaga
agagacaaaaagagatcaagaactagagatagcagttggtccagaagaagccaaactttg
tctctaagtagtgaaagcacaagcagatcaaggtctcgtagcagtgatcatggtaaaaga
agatcacggagcagaaatagagatcgttattatttaagaaataattatggaagcagatac
aaatgggagtatacttattacagtagaaacaaggacagggatgggtacgaatcatcttac
aggaggaggactctgtccagagctcattattctagacagtcttcaagtccagaagttaga
gttcagtccttttctgaaagaacaaatgctaggaaaaaaaataatcacagtgagaggaag
tattactactatgaaaggcacagatcaaggagcctgtctagtaacagatcaaggactgca
tctaccgggactgaccgggtgagaaatgaaaagcctggagggaaacgaaaatacaaaaca
cgccatttggagggtactaacgaagtggctcagccatctcgtgaatttgcttctaaagca
aaggacagtcattaccaaaaatcttcatcaaaattggatggaaactacaaaaatgagagt
gataccttttcagacagccgatcatcagacagagagacaaaacacaaaaggagaaaaagg
aagacccggagcctaagtgtagagatagtttatgaaggaaaagctactgatacaactaaa
caccataaaaagaaaaagaagaaacataagaagaagcataagaagcaccatggagataat
gcttcacgttccccagttgtaattaccattgacagtgacagtgataaggattctgaagta
aaggaggatacagaatgtgaccatagtggtcctcaagaccctctaccaagtgagtttttg
gctccttccttggaaccatttgaaactaaagatgtagttacaatagaagatgaatttggt
gtgctggacaaggaatgtgatattgccacacttactaacaacttgaataatgccaacaaa
actgtagataatattccacctctggcagcttcagttgaacaaactctcgatgtaagagaa
gacagcacctttgtttctgatttgcagaaccagcccactaacattgtgtctattcaaact
gagccatcaaggcagttgccatctccacggacatcattaatgtcagtatgtcttggtaga
gactgtgatatgtcttaa
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