KEGG   Symphalangus syndactylus (siamang): 129491319
Entry
129491319         CDS       T10134                                 
Symbol
COL6A6
Name
(RefSeq) collagen alpha-6(VI) chain
  KO
K06238  collagen type VI alpha
Organism
ssyn  Symphalangus syndactylus (siamang)
Pathway
ssyn04151  PI3K-Akt signaling pathway
ssyn04510  Focal adhesion
ssyn04512  ECM-receptor interaction
ssyn04518  Integrin signaling
ssyn04820  Cytoskeleton in muscle cells
ssyn04974  Protein digestion and absorption
ssyn05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:ssyn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    129491319 (COL6A6)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129491319 (COL6A6)
   04518 Integrin signaling
    129491319 (COL6A6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129491319 (COL6A6)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129491319 (COL6A6)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    129491319 (COL6A6)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    129491319 (COL6A6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssyn04147]
    129491319 (COL6A6)
   00536 Glycosaminoglycan binding proteins [BR:ssyn00536]
    129491319 (COL6A6)
Exosome [BR:ssyn04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   129491319 (COL6A6)
Glycosaminoglycan binding proteins [BR:ssyn00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   129491319 (COL6A6)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   129491319 (COL6A6)
SSDB
Motif
Pfam: VWA VWA_2 Collagen VWA_3 vWA_SIBA-E Radical_SAM
Other DBs
NCBI-GeneID: 129491319
NCBI-ProteinID: XP_055151437
LinkDB
Position
10:complement(107919096..108034189)
AA seq 2262 aa
MLLILFLVIICFHISVNQDSGPEYADVVFLVDSSDRLGSRSFPFVKMFITKMINSLPIEA
DKYRVALAQYSDKLHSEFHLSTFKGRSPMLNHLRKNFGFIGGSLQIGKALQEAHRTYFSA
PADGRDKKQFPPILVVLASSESEDDVVEASKALQKDGVKIISIGVQKASEENLKAMATSQ
FHFNLRTVRDLSMFSQNMTHIIKDVTKYKEGAVDDIFVEACQGPSVADVVFLLDMSINGS
EENFDYLKGFLEESVSALDIKENCMRVGLVAYSNETKVINSLSMGINKSEVLQHIQNLSP
RTGKAYTGAAIKKLRKEVFSARNGSRKNQGVPQIAVLVTHRDSEDNVTKAAVNLRREGVT
IFTLGIEGASDTQLEKIASHPAEQYVSKLKTFADLAAHNQTFLKKLRNQITHTVSVFSER
TETLKSGCVDTEEADIYLLIDGSGSTRATDFHEMKTFLSAVVGMFNIAPHKVRVGAVQYA
DSWDLEFEINKYSNRQDLGKAIENIRQLGGNTNTGAALNFTLSLLQKAKKQRGNKVPCHL
VVLTNGMSKDSILEPANRLREEHIRVYAIGVKEANQTQLREIAGEEKRVYYVHDFDALKD
IRNQVVQEICAEEACKEMKADIMFLVDSSGSIGPENFSKMKTFMKNLVSKSQIGPDRVQI
GVVQFSDINKEEFQLNRFMSQSDISNAIDQMAHIGQTTLTGSALSFVSQYFSPTKGARPN
IRKFLILITDGEAQDIVKEPAVALRQEGVIIYSVGVFGSNVTQLEEISGRPEMVFYVENF
DILQRIEDDLVFGICSPREECKRIEVLDVVFVIDSSGSIDYDEYNIMKDFMIGLVKKADV
GKNRVRFGALKYADDPEVLFYLEDFGTKLEVISVLQNDQAMGGNTYTAEALGFSDHMFTE
ARGSRLNKGVPQVLIVITDGESHDADKLNATAKALRDKGIIVLAVGIAGANPLELLAMAG
SSDKYFFVETFGGLKGIFSDVTASVCNSSRVDCEIDKVDLVFLMDGSTSIQPNDFKKMKE
FLASVVQDFDVSLNRVRIGAAQFSDTYHPEFPLGTFIGEKEISFQIENIKQIFGNTHIGA
ALRKVEHYFRPDMGSRINTGTPQVLLVLTDGQSQDEVAQAAEALRHRGIDIYSVGIGDVD
DQQLIQITGTAEKKLTVHNFDELKKVNKRIVRNICATGGESNCFVDVVVGFDVSTQEKGQ
TLLEGQPWMETYLQDILRAISSLNGVSCEVGTETQVSVAFQVTNAMEKYSPKFEIYSENI
LNSLKDITVKGPSLLNANLLDSLWDTFQNKSAARGKVVLLFSDGLDDDVEKLEQKSDELR
KEGLNALITVALDGPADSSDLADLPYIEFGKGFEYRTQLSIGMRDLGSWLSKQLVNVAER
TCCCLFCKCIGGDGTMGDPGPPGKRGPPGFKGSEGYLGEEGMAGERGAPGPVGEQGTKGC
YGTKGPKGNRGLNGQEGEVGENGIDGLNGEQGDNGLPGRKGEKGNEGSQGSPGKRGTPGD
HGAKGLRGDPGAPGVDNSIEGPTGLKGERGRQGRRGWPGPPGTPGSRRKTAAHGRRGHTG
PQGTVGIPGPDGLEGSLGLKGPQGPRGEAGVKGEKGGVGSKGPQGPPGPGGEAGNQGRLG
SQGNKGEPGDLGEKGAVGFPGPRGLQGNDGSPGYGSVGRKGAKGQEGFPGESGPKGEIGD
PGGPGETGLKGARGKMITAGLPGEMGSPGEPGPPGRKGVKGAKVLASFSTCELIQYVRDR
SPGRHGKPECPVHPTELVFALDHSRDVTEQEFERMKEMMAFLVRDIKVRENSCPVGARIA
ILSYNSHARHLVRFSDAYKKNQLLREIEAIPYERSSASREIGRAMRFISRNVFKRTLPGA
HTRKIATFFSSGQSADAHSITTAAMEFGALEIIPVVITFSNVPSVRRAFAIDDTGTFQVI
VVPSGADYIPALERLQRCTFCYDVCRPDASCDQARPPPVQSYMDAAFLLDGSRNVGSAEF
EDIRAFLGALLDHFEITPEPETSVTGDRVALLSHAPPDFLPNTQKSPVRAEFNLTTYRSK
RLMKRHVHESVKQLNGDAFIGHALQWTLDNVFLSTPNLRRNKVIFVISAGETSHLDGEIL
KKESLRAKCQGYALFVFSLGPNWDDKELEDLASHPLDHHLVQLGRIHKPDHSYGVKFVKS
FINSIRRAINKYPPINLKIKCNRLNSVDPKQPSRPFRSFVPGPLKATLKEDVLQKAKFFQ
DKKYLSRVARSGRDDAIQNFTRSTSHTFKNGRRIESAPKRHD
NT seq 6789 nt   +upstreamnt  +downstreamnt
atgttgctaattttgttcctcgtgataatttgtttccatatttctgtgaaccaagattct
ggccctgagtatgcagatgtcgtgtttttggtggacagctccgatcgcctgggatccagg
tccttcccatttgtgaaaatgttcatcaccaaaatgatcaacagtctccccatagaggcc
gacaaataccgtgtggccctggcccagtacagtgataaacttcacagtgaattccacctg
agcaccttcaaaggcaggagcccgatgctgaaccacctcaggaagaactttggattcatt
ggcgggtccctgcagataggaaaggctcttcaggaggctcacaggacttatttctctgca
cccgcagatgggagagacaagaaacagtttcccccaattctagtggtcctggcttcatct
gagtctgaggatgatgtggtagaggcttcaaaggcccttcagaaagacggagtgaaaatc
atctccataggggtgcagaaagcttctgaggaaaaccttaaggccatggccacatctcag
ttccatttcaaccttcggacagtcagagacctcagcatgttttcccaaaacatgacgcat
atcatcaaggatgtaacaaagtacaaggagggagcagttgatgacatctttgtagaagct
tgccaaggcccttctgtggccgatgttgtgttcctattggatatgtcaatcaatggaagc
gaggagaactttgactatcttaaaggattcttggaagaaagtgtatctgcccttgacata
aaggaaaattgcatgagggttggccttgtggcctatagcaatgagacaaaagtgataaat
tcattgagcatgggcataaataagtcagaggttctccagcatatacagaacctttctccc
cgaactgggaaggcctatactggagctgccatcaaaaagctcaggaaggaagtttttagt
gcacgaaatggcagtcggaagaatcagggggtgccccagattgccgtgctggtgacccac
cgagattcagaagacaacgtgacaaaagcagctgttaacctccgacgggagggtgtgacc
atcttcaccctgggcatagagggcgccagcgacacccagttggaaaagatagcatcccac
cctgctgagcagtatgtctccaaactgaagaccttcgctgacctggctgctcacaaccag
acatttctgaagaagctgcggaaccaaataacacacacagtatctgtcttttcagagagg
accgaaacgctcaaatctggttgtgtggacactgaggaagcagacatctatctgcttatt
gatggctcagggagcacccgggccacagatttccatgaaatgaagaccttcctgtcagcg
gtggtagggatgttcaacattgctccccataaggtgcgggttggggccgttcagtatgct
gacagctgggacttggaatttgagatcaataaatactccaacaggcaggatttgggaaag
gccattgagaatatcaggcagttgggtgggaatacaaacacaggtgcagcactgaatttc
acactgagtctgttgcaaaaagcaaagaagcagcgaggaaacaaagttccatgccacctt
gttgtcctgacaaatggcatgtccaaggatagcatcttggagcctgcaaacagactgaga
gaagagcacatccgagtttatgctatcggggtcaaggaggccaaccaaacacagctgcga
gaaattgcaggagaggaaaagagagtgtattacgtgcatgactttgatgcattgaaagac
ataagaaaccaagttgttcaagaaatctgtgctgaagaagcttgcaaagagatgaaagct
gacattatgtttctggtggacagttctggaagtataggacctgaaaacttcagcaaaatg
aaaacatttatgaaaaacctggtgagcaagtctcagattggaccagatcgggtgcaaatt
ggtgtagtccagttcagcgacatcaataaggaagagtttcagctcaacagattcatgtcc
caaagcgacatttcaaatgcaatagaccaaatggctcacattggacaaaccaccctgact
ggtagtgccctgagctttgtgtctcagtacttcagccccaccaagggcgcccggcccaac
atcagaaagtttctcatcctcatcacggatggtgaagctcaggacatagtaaaggaacca
gcggtagcgcttcggcaggaaggtgtaatcatctattctgtgggagtgtttggctccaat
gtcacccagcttgaggagatcagtggcaggcccgagatggttttttatgttgagaatttt
gacattctgcagcgcattgaagatgatcttgtttttggaatatgcagcccccgtgaagaa
tgcaagcggattgaagttttagatgttgtgtttgtcattgatagctctggcagcattgac
tatgatgagtataatatcatgaaggattttatgattggcttagtgaaaaaagctgatgtg
ggcaagaatcgggtccggtttggggctctgaagtatgctgatgacccagaggtgctgttt
tatctggaagactttggcacaaaactggaggtaatttcagtgctccagaatgaccaagcc
atgggtggcaatacttatactgctgaggcactgggcttctcagaccacatgttcactgaa
gcccggggcagccgcctgaacaagggagtcccccaagtcctcattgtgatcaccgatggg
gaatcccatgatgctgataaactcaatgccacggcaaaggccttgcgggacaaaggcatt
attgtcctggctgtggggattgctggtgccaatcccctggagctgttagccatggcagga
tcaagcgacaagtacttcttcgtggagacttttggaggtctgaagggaatattttcagat
gtgacagccagtgtctgcaactcttcaagagtagattgtgaaattgacaaagtagatctt
gttttccttatggacggttcaactagcattcagccaaatgacttcaagaaaatgaaggaa
tttctggcatccgttgttcaagactttgatgtcagcctcaacagagtgcgtataggagcg
gcccagtttagcgatacctatcacccggagtttccactgggaactttcataggtgaaaaa
gagatatcatttcagattgaaaacatcaagcagatctttggaaacacacacatcggtgct
gcactcaggaaggtggaacattacttcaggccagacatgggcagcagaataaatacaggt
accccacaggtgctgctggtccttacagatggccagtcccaagacgaggtggcccaggcg
gcggaagccctgagacacagaggtatcgacatctactccgtgggcattggggatgtggat
gaccagcagctcattcagatcaccgggactgcagagaaaaaactgacagtacacaacttc
gacgaactgaagaaggtcaataaaaggatcgttcgcaacatctgtgccacagggggtgaa
agcaactgtttcgtggatgttgtggtgggatttgatgtctcaactcaggagaaagggcag
actttgcttgaaggtcagccttggatggaaacctaccttcaagacatcttacgtgccatc
agctccctcaatggagtaagctgtgaggtgggcacagagactcaggtcagtgtggctttt
caagtgaccaatgccatggaaaaatattctcccaagtttgagatctacagtgaaaacata
ctgaatagcttgaaggatataacagttaaaggaccatctcttctcaatgcaaacctctta
gattctctatgggatacatttcagaataaatcggctgctcgaggaaaggtggtcctttta
ttttcagatggattggatgatgatgttgagaaacttgaacaaaaatctgatgaacttaga
aaagaaggcctgaatgccctcataactgttgctctggatggacctgctgattcaagtgac
ttggctgatcttccctatatcgaatttgggaaaggatttgagtacaggacacagctctct
attggcatgagagatcttggaagctggctgtcaaagcagctggtcaatgttgctgaaagg
acatgctgctgtttgttctgcaagtgcattggaggagatggcacaatgggagatcctgga
ccaccagggaaaaggggacctccaggttttaaaggcagtgaaggctacctgggagaggag
ggaatggctggagaaagaggagcccctggaccagtgggagagcaaggtactaagggatgc
tatggcaccaaaggtcctaagggaaacaggggactaaatggacaggagggagaagttggg
gaaaatggaattgatggattaaatggagaacagggtgataatggtcttcctggaagaaaa
ggagaaaagggtaatgagggatcccagggaagcccagggaagagagggactcctggtgac
catggagcaaagggcctgcgaggggatcccggagctcctggagttgataatagcatagaa
ggacccacaggcttgaaaggagaacgtggaagacaaggtagaagaggctggccaggcccc
cccgggacaccaggctccagaagaaagacagcagctcatggcagaaggggacatacaggc
ccacagggaacagtaggcatcccaggaccagatggacttgaaggctccctgggacttaag
ggccctcagggcccaagaggagaggctggtgtgaaaggagaaaaaggaggtgtaggaagt
aaaggtccccaggggcctccaggacccggaggagaggcagggaatcaaggccgtttggga
agccaaggaaataaaggagaacctggagatctgggagaaaaaggagctgttggctttcct
ggtcctcgtggcttgcagggcaatgatggcagtccaggttatggtagtgtcggacgcaag
ggagcaaagggacaagaaggattccctggagaaagtggacctaagggtgagattggggac
cctggtggtccaggagagactgggctgaagggagctagaggcaaaatgataactgctggg
cttccaggagagatgggatcccctggggaaccaggacctcctggacgtaagggtgtgaaa
ggagccaaagtcttggcttcattttctacatgtgagctcattcagtatgtgcgagaccgc
agtcctggcaggcatggaaaacccgaatgcccagtgcacccaaccgagttggtgtttgcc
ctagaccactcccgggatgttactgagcaggaatttgagcggatgaaggagatgatggct
ttcctggtgagagacattaaggtccgggagaacagctgccccgtaggagcgcgcatcgcc
atcctctcctataactcccacgccaggcacctcgtgcgcttctcagacgcctacaagaag
aatcaacttctcagggaaattgaagccattccttatgagagatcctctgccagccgggag
attggcagagcaatgcggtttatttccaggaatgtcttcaagcggacgcttccgggggcg
cacacgagaaaaatcgccacgtttttcagcagcggtcagtctgcggatgcccactccatc
accacggccgccatggagttcggcgcgcttgaaatcattcccgtggtgatcactttcagc
aacgtgccctcggtcaggcgcgcatttgcgattgacgacactgggacatttcaagtaata
gtggttccctccggggctgactacataccagcattagagagactccagcgctgcactttc
tgctatgatgtatgcaggccagatgcttcttgtgaccaagccagaccaccccctgtgcag
tcttacatggatgctgctttccttctggatggctcccggaacgtgggaagtgctgaattt
gaagacataagagccttccttggagcactattagatcactttgaaatcaccccagagccg
gagacttctgtcactggagaccgggtggccctattgagccatgctccccccgacttccta
cccaacactcagaagagtccagttagagctgagttcaatcttaccacctacagaagtaag
cgcctcatgaagaggcatgtgcacgagtcagttaaacaactaaatggagatgcttttatt
ggtcatgccttacagtggactctggacaatgtatttttaagtacacccaatctgagaaga
aacaaagtcatatttgtgatatctgctggggaaaccagccacttagatggggaaatctta
aagaaggaatccttgcgagccaaatgtcagggatatgccctatttgtgttttcccttggc
cctaactgggatgacaaggaactggaggatctcgccagccaccctttggatcaccacctg
gtccagcttggccgaattcataaacctgaccacagttatggtgtgaagtttgtgaagtcc
tttatcaactcaatcaggcgtgcaatcaacaaatatccaccaataaacttaaaaataaag
tgcaacagacttaactcagtagatccaaagcagccctcacgaccgttccgaagctttgtt
cctggaccacttaaagctaccctcaaagaagatgtattacagaaggcaaaattttttcaa
gacaaaaaatacctttcaagagtagcaagaagtggcagagatgatgctattcaaaatttt
accagaagcacctcccatacctttaagaacggaagaaggatagaaagtgctcccaaacga
catgattaa

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