Spiroplasma syrphidicola: SSYRP_v1c03180
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Entry
SSYRP_v1c03180 CDS
T02677
Symbol
alaS1
Name
(GenBank) alanyl-tRNA synthetase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
ssyr
Spiroplasma syrphidicola
Pathway
ssyr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssyr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SSYRP_v1c03180 (alaS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssyr01007
]
SSYRP_v1c03180 (alaS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssyr03016
]
SSYRP_v1c03180 (alaS1)
Enzymes [BR:
ssyr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
SSYRP_v1c03180 (alaS1)
Amino acid related enzymes [BR:
ssyr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SSYRP_v1c03180 (alaS1)
Transfer RNA biogenesis [BR:
ssyr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SSYRP_v1c03180 (alaS1)
Prokaryotic type
SSYRP_v1c03180 (alaS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
Motif
Other DBs
NCBI-GeneID:
16153228
NCBI-ProteinID:
AGM25912
UniProt:
R4U3D3
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All DBs
Position
complement(339670..341061)
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AA seq
463 aa
AA seq
DB search
MDNTTINAWWQNLKNDQNNGNFPLTVFNGYTKTSDHGTVIGLFNKDGQAVKELTGVGFII
FDQTVFYALGGGQISDTGYLKQGTNLIPVYDLNKQIFKKVYVHLVDTGNVTIKINDVLEQ
EINTTRRNNLTKNHTAQHILSYTIEKIVNDGELTDSVLIKEESFLLAMNKTDNWLDVLLQ
ARDKIITTFINHDIARIEHQMPIAEARAMNLAHPSFEYDPIVRVVEFPAATIDLCGGTHV
NNLNEINYFEIWDCWVDKKKVRMESSTNQVATAQYFTTWTNNKITELQQLVDRIKKIDPQ
FSYQLPVLTTPTTFIEKMALENEIKTIEHELTEISKEKNKLLVQKVNELELEPIIEPINN
NLNLVSFTVNDEILTLELMRSKLNKFFQDYQNSLIYFNNPTLKYAYISFTKINSVNFNLN
QYFQANKAALNLTGGGTPFFLNITYQDNLDHFMETLLSEIKKS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggataacacaacaattaatgcctgatggcaaaatctgaaaaatgatcaaaataacggt
aatttcccgttaacagtctttaatggctatactaaaacaagcgaccacggaactgtcatt
ggcttatttaacaaagatggccaagcagttaaggaattaacaggagttggttttattatt
ttcgatcaaactgttttttatgccctcgggggaggacaaatctcagatacagggtattta
aaacaaggaactaatttaatcccagtttatgatttaaataaacaaatttttaaaaaagtt
tatgttcacttagttgatactggtaatgtgacaattaaaattaatgatgttttagagcaa
gaaattaatacaactcgtcgtaacaatttaacaaaaaatcatactgcgcaacatatttta
tcttatacaattgaaaaaattgttaatgatggagaattaaccgattctgtcttaattaaa
gaagaatcatttttactagcaatgaataaaactgataattgactagatgttttactacaa
gctcgcgataaaatcattacaacctttattaatcatgatatcgcgcgaatcgaacaccaa
atgccaattgccgaagcccgcgcaatgaatttagcccaccctagttttgaatatgaccca
attgttcgggtagttgaattcccagcggcaacaattgatttatgtgggggaacacatgtt
aataatttaaatgaaattaattattttgaaatttgagattgttgagttgataaaaagaaa
gtccgcatggaatcttcaacaaaccaagtcgccactgctcaatactttaccacttgaact
aacaataaaattacagagctacaacagttagttgatcgaattaaaaaaattgatccccaa
ttttcttatcaattaccagttttaacaacccctactacttttattgaaaaaatggcccta
gaaaatgagattaaaacaatcgagcatgaattaacagaaattagtaaagaaaaaaataaa
ctcctagtccaaaaagtaaatgaattagaacttgaaccgattattgaaccaattaacaat
aacttaaatttagttagtttcaccgttaatgatgagattttaacccttgagttaatgcgt
agtaaacttaataagtttttccaagattatcaaaatagtctaatttactttaataaccca
accctaaaatatgcttatatatcatttacaaaaattaatagtgttaactttaatttaaac
caatattttcaagcaaataaggcagctttaaatttaacagggggaggaacaccattcttt
ttaaacattacttaccaagataatttggatcattttatggaaaccttattatcagaaatt
aaaaaaagctaa
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