Spiroplasma taiwanense: STAIW_v1c10020
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Entry
STAIW_v1c10020 CDS
T02742
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
stai
Spiroplasma taiwanense
Pathway
stai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
STAIW_v1c10020 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stai03021
]
STAIW_v1c10020 (rpoA)
03400 DNA repair and recombination proteins [BR:
stai03400
]
STAIW_v1c10020 (rpoA)
Enzymes [BR:
stai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
STAIW_v1c10020 (rpoA)
Transcription machinery [BR:
stai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
STAIW_v1c10020 (rpoA)
DNA repair and recombination proteins [BR:
stai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
STAIW_v1c10020 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
AF1548-like_C
HHH_5
HAUS1
Motif
Other DBs
NCBI-ProteinID:
AGR41588
UniProt:
S5MCZ4
LinkDB
All DBs
Position
complement(978524..979477)
Genome browser
AA seq
317 aa
AA seq
DB search
MKQFAKPEFKLLKEEKNRNYGEFKVEPLERGFGTTLGNALRRTLLSSTPGAAVYAIKIVG
AAHEFTSIEGIVENVSRIILNLKKLALKIDTKIFEDEEVVELKINLSRVGDVTAGDIDLP
TGVDVLNPELHICTIADGGILDLTMFAKNSRGYRTFRDNKKEKLVVDAITIDSNYSPIVK
VAYNVDTTKIGKSVDLEKLILKVETDGTVTASDAVATAAKILVEHLQFFVNLNDEINELN
IIGTTNEEDEKELDRLIEDLDFTQRSLNCLKRANINTLRDLVSRSEDDIQEIRNLGRKSL
KEIKDKVVQLGLTFRQD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatttgcaaaacctgaatttaaattattaaaagaagagaaaaacagaaattat
ggggaattcaaagttgaacctttggaaagaggatttggaacaacactaggtaatgcttta
agaagaacacttctatcatcaacaccaggtgcggcagtttatgcaataaaaattgttggt
gctgcgcatgaatttacttcaattgaaggaattgtagaaaatgttagtagaattatatta
aatttaaaaaaattagcactaaaaatagatacaaaaatttttgaagatgaagaagtagta
gaattaaaaattaatctttcaagagttggggatgtaactgcaggagatattgatttacct
actggagttgatgttttaaatccagagttacatatctgtacaattgcagatgggggaata
ttagatttaacaatgtttgcaaaaaactcaagagggtatagaacttttagagataataaa
aaagaaaaattagtagtagatgctattacaatagattcaaattattctccaatagtaaaa
gttgcatataatgttgatacaacaaaaattggaaaatcagtggaccttgaaaagttaatt
ttaaaagtggaaactgacggaactgtaacagcaagtgatgctgttgcaacagcagcaaaa
attttggtagaacatttacaattctttgtaaatttaaatgatgaaatcaatgaattaaat
ataattggtacaactaatgaggaagatgaaaaagaattagatcgtttaattgaagatttg
gactttactcagagaagtttaaattgtttaaaaagagcgaatataaatactctacgagac
ttagtctcacgtagcgaagacgatattcaagaaattagaaacttgggtagaaaatcatta
aaagaaattaaggataaagtagttcaattaggacttactttcagacaagactag
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