Stanieria sp. NIES-3757: STA3757_06680
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Entry
STA3757_06680 CDS
T05130
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
stan
Stanieria sp. NIES-3757
Pathway
stan02024
Quorum sensing
stan03060
Protein export
stan03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
stan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
STA3757_06680 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
STA3757_06680 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
STA3757_06680 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
stan02044
]
STA3757_06680 (ffh)
Enzymes [BR:
stan01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
STA3757_06680 (ffh)
Secretion system [BR:
stan02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
STA3757_06680 (ffh)
Eukaryotic Sec-SRP protein
STA3757_06680 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
ArsA_ATPase
ParA
6PF2K
AAA_33
nSTAND3
TPP_enzyme_M
TIP49
APS_kinase
nSTAND_NTPase5
AAA_16
NPHP3_N
ATPase
KTI12
AAA_31
AAA_17
Motif
Other DBs
NCBI-ProteinID:
BAU63306
LinkDB
All DBs
Position
complement(727970..729391)
Genome browser
AA seq
473 aa
AA seq
DB search
MFDALAERLEDAWKKLRGQDKISKSNIQDALKEVRRALLEADVNLQVVKNFIAEVEQEAN
GAEVISGVNPGQQFIKIVYDELVKVMGESNVPLAQADKAPTIILMAGLQGTGKTTATAKL
ALYLQKQEQTCLMVGTDVYRPAAIDQLLTLGKQINVPVFEMGTDANPVEIARQGIEKAKE
LGVDTVLIDTAGRLQIDQDMMAELAQIKETVQPHDTLLVVDAMTGQEAANLTRTFHEQIG
ITGAILTKLDGDSRGGAALSVRQVSGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDIL
TLVEKAQEEIDLADMENMQSKILEARFDFNDFLKQMRLLKNMGSLGGVLKLIPGMNKISG
ADLQKGETQLKRTEAMINSMTKEERSNPELLAQSPSRRRRVAKGSGFEETDVSKLIKDFT
RMRSLMQQMGKGMPAIPGMGGMPGMGGMPGFRGYQGGSKKKKKTKKKKGFGSL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgctctagcagaacgtttagaagatgcgtggaagaaactgcgcggtcaagat
aaaatcagcaaatctaatatccaagatgcgcttaaagaggtacgtcgtgctttattagaa
gctgatgtcaaccttcaagtagttaagaattttattgcagaagttgaacaggaagctaat
ggtgcggaagtcatttcgggagtaaacccaggacagcaatttatcaaaattgtttatgat
gaattagtcaaagtgatgggggaaagcaatgttcctcttgctcaagctgacaaagcccct
accataattctaatggcaggtttacagggtacagggaaaactacagcaactgccaaatta
gctctttatttgcaaaaacaagaacaaacttgtttaatggtcggtacagacgtttatcgt
cctgctgcgatcgatcagttattaactttaggtaagcaaataaatgttcctgtttttgaa
atgggaaccgatgccaatcctgtagaaattgcacgtcaagggattgagaaagccaaagaa
ttaggtgtagatacggttttgattgataccgctggacgattgcagatcgatcaagacatg
atggcagaattagctcaaattaaggaaacggttcagcctcatgatactttattggtagta
gatgccatgacggggcaagaagcagccaatcttacccgtactttccacgaacaaatcggc
attacaggggcaattctaaccaagttagatggagatagtcgtggtggtgcagctttatca
gtaagacaagtatcgggacagccaattaagtttgttggtgttggggaaaaagtagaggct
ttagaacctttttatccagacagattagcttcccgtattctcaatatgggagatattctg
actttagtagaaaaagctcaggaagagattgacttggctgatatggagaatatgcagtcg
aagattctcgaagctagatttgattttaacgacttcctcaaacaaatgcgcttactaaag
aatatgggttctttgggcggtgtgctgaagttgattcctgggatgaataaaattagtggt
gcggatctacaaaaaggagaaacccaactcaaacgcaccgaagcgatgatcaactccatg
acgaaggaagaaaggagtaatcctgaattactagcgcagtctcctagtcgtcgtcgtcgt
gttgctaaaggttctggttttgaagaaactgatgtctctaaattaatcaaagattttacc
cgaatgcgatcgctgatgcaacaaatgggtaagggaatgcctgctatacctggtatgggt
ggtatgcctgggatgggcggtatgcctggatttcgaggctatcaaggcggttctaagaaa
aagaaaaaaaccaagaaaaagaaaggttttggttctctataa
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