Spongiibacter taiwanensis: NCG89_02355
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Entry
NCG89_02355 CDS
T08367
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
staw
Spongiibacter taiwanensis
Pathway
staw02024
Quorum sensing
staw03060
Protein export
staw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NCG89_02355 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NCG89_02355 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCG89_02355 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
staw02044
]
NCG89_02355 (ffh)
Enzymes [BR:
staw01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NCG89_02355 (ffh)
Secretion system [BR:
staw02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NCG89_02355 (ffh)
Eukaryotic Sec-SRP protein
NCG89_02355 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
cobW
AAA_30
AAA_31
ABC_tran
AAA_19
AAA_33
YqeC
KTI12
T2SSE
APS_kinase
AAA_14
AAA_24
Mg_chelatase
DnaB_C
ArsA_ATPase
TsaE
FAD_binding_4
ResIII
AAA_28
Thymidylate_kin
AAA_16
SMC_N
Rad17
ATP_bind_1
AAA_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
USA43639
LinkDB
All DBs
Position
complement(474581..475954)
Genome browser
AA seq
457 aa
AA seq
DB search
MFESLQERLSQTLRSVTGQARLSEDNIKDAMRDVRMALLEADVALPVVKDFVEAVRSRAV
GQEVSKSLSPGQMFIKIVQQELENIMGQSNEALNLSVQPPAVILMAGLQGAGKTTSVAKL
AKFLQDKQKKKVLVVSADVYRPAAIKQLETVAGEVGATFFPSTIEQKPVDIAKGAISEAK
LRFFDVVIVDTAGRLHVDADMMTEITDLHAAINPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVILTKADADSRGGAALSVRHITGKPIKFIGTGEKTDALDPFYPDRIASRILGMGDI
LSLIDEAEAKLDKQKAEKLAKKLKKGKKFDLEDLRDQLQQMQQMGGLGGLLDKLPGMGNM
AQMAQSQVDSKMFTRMEAIINSMTPAERRNPDILNGSRKRRITVGSGTEIQDLNRLLKQH
KQMAKMMKKMGQKGGMTNMMRGMGGMMPPGGGRFPGM
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagagcttgcaggaacgcctttcccagaccttgcgctcggtaaccggtcaggcc
cggttgagtgaggacaatatcaaggatgcgatgcgcgatgtgcgcatggcgttgcttgag
gccgatgtcgccctgccggtagtgaaggactttgtcgaggccgtacgcagccgcgcggtg
gggcaggaagtcagcaagagcctgagccccgggcagatgtttatcaagatcgtccagcag
gagctggagaacatcatgggccaaagcaatgaggccctgaatctgtcggtgcagcccccg
gcggtgatcctgatggcgggcctgcagggtgcaggtaaaaccacctcggtggccaagctg
gccaagtttctccaggacaagcagaagaaaaaggtgctggtggtcagcgccgacgtgtac
cgcccggcagcgatcaaacagttggaaaccgttgctggcgaagtgggggcgacctttttc
cccagtacaattgagcaaaagccggtggatatcgccaaaggcgcaatcagcgaagccaag
ctgcgcttttttgatgtggtgattgtggatacggccggtcgactccacgtcgacgccgat
atgatgaccgaaatcaccgatttgcacgcggccatcaatccggtcgaaaccctgttcgtg
gtggatgccatgaccggtcaggatgcggccaataccgcaaaggccttcaacgaggcgctg
ccactcaccggggtgattttgaccaaggctgacgccgatagccgcggtggtgctgcgctg
tcagtgcgtcatatcactggcaagcccatcaagtttatcggtaccggcgaaaaaaccgat
gccctcgaccccttctaccctgatcgtatcgcctcccgtattttggggatgggcgacatc
ctgtcgctgatcgatgaagccgaggccaagctcgacaagcaaaaagccgagaagctggcc
aagaagctgaaaaagggcaagaagttcgatctggaagatctgcgcgaccagcttcaacaa
atgcagcagatgggcgggcttggtggcctgctcgacaagctgccgggcatgggcaatatg
gcccagatggcccagagtcaggtggatagcaaaatgttcacgcgcatggaagccatcatc
aactccatgacgcccgctgagcgccgcaatccggatattctcaatggctctcgcaagcgc
cgtatcaccgttggctcgggcaccgaaatccaggatctgaatcgcctgctaaagcagcac
aagcagatggcgaagatgatgaagaagatggggcagaagggcggcatgaccaatatgatg
cgcggaatgggcggtatgatgccgcccggcggtggtcgcttccctggcatgtaa
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