KEGG   Sphingomonas taxi: MC45_02880
Entry
MC45_02880        CDS       T03398                                 
Name
(GenBank) nucleotide-binding protein
  KO
K06958  RNase adapter protein RapZ
Organism
stax  Sphingomonas taxi
Brite
KEGG Orthology (KO) [BR:stax00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stax03019]
    MC45_02880
Messenger RNA biogenesis [BR:stax03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     MC45_02880
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_22 AAA_33 ZSWIM1-3_C AAA_18 Rad17 AAA_16 AAA_29 ABC_tran EccE AAA_28 CoaE AAA_30 APS_kinase RsgA_GTPase dNK
Other DBs
NCBI-ProteinID: AIT05520
UniProt: A0A097EDB3
LinkDB
Position
complement(661810..662718)
AA seq 302 aa
MTKDILLVTGLSGAGKSTVLKTLEDLGWEVVDNLPLVLLDRLLDAPLAAGAADDSQPLAI
GIGARTRDFDPTRIVERIRSLRDDHGLDIGMLFLDCSGAELERRYSETRRRHPLAPDRPA
GDGIARERELLRPLRDWANRLIDTTDLTANALAQQVRTTFAGHGRDAPVLSIQSFGFARG
LPRNADLVFDMRFLRNPHWDPVLRPGTGLDADVAAYVAADPAYPAAMEQIGGLLELLLPR
YRAEGKSYVSVAIGCTGGRHRSVHVTERLADRLRKAGFSPTITHRDLGAAPQDSLEGPPA
SK
NT seq 909 nt   +upstreamnt  +downstreamnt
atgaccaaggacatattgctcgtcaccggcctgtccggcgcgggcaagtcgacggtgctc
aagacgctcgaggatctcggctgggaggtggtcgacaatctgccgctggtgctgctcgac
cggctgctcgacgcgccgctcgccgcgggggcggcggacgacagccagccgctggcgatc
ggcatcggcgcgcgcacccgcgatttcgacccgacgcggatcgtcgagcgcatccgctcg
ctgcgcgacgatcatggcctcgatatcggcatgctgttcctcgactgttcgggcgccgag
ctggagcggcgctattcggagacgcggcggcgccacccgctcgcccccgaccggccggcg
ggcgacggcatcgcccgcgagcgcgaattgctgcgcccgctgcgcgactgggccaaccgg
ttgatcgacaccaccgatctcaccgccaatgcgctggcgcagcaggtgcgcacgaccttc
gccggccacgggcgcgacgcgccggtgctgtcgatccagtcgttcggcttcgcgcgcggg
ctgccgcgcaacgccgacctcgtcttcgacatgcggttcctgcgcaatccgcattgggac
ccggtgctgcgacccggcaccggcctcgatgccgacgtcgccgcttatgtcgcggcggac
cccgcctatccggcggcgatggaacagatcggcggcctgctcgaattgctgctgccgcgc
tatcgcgccgagggcaaatcctatgtcagcgtcgcgatcggctgtaccggagggagacac
agatcggtccatgtcaccgagcgtctcgctgaccggttgcgcaaagcgggtttttcgccc
accattacgcatcgcgacctcggggccgcaccgcaggactcgctcgaggggccgccggcc
agcaaatga

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